RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 ACAD9Q9H845 621 aa13.41□□□□□ -0.26
SPTBN2-201ENST00000309996 SMG5Q9UPR3 1016 aaKnown RBP13.41□□□□□ -0.26
SPTBN2-201ENST00000309996 BIVM-ERCC5R4GMW8 1640 aa13.41□□□□□ -0.26
SPTBN2-201ENST00000309996 ESYT3A0FGR9 886 aa13.41□□□□□ -0.26
SPTBN2-201ENST00000309996 STRNO43815 780 aa13.41□□□□□ -0.26
SPTBN2-201ENST00000309996 BMP10O95393 424 aa13.41□□□□□ -0.26
SPTBN2-201ENST00000309996 NT5C2P49902 561 aa13.41□□□□□ -0.26
SPTBN2-201ENST00000309996 STX3Q13277 289 aa13.41□□□□□ -0.26
SPTBN2-201ENST00000309996 UNC5CLQ8IV45 518 aa13.41□□□□□ -0.26
SPTBN2-201ENST00000309996 FLCNQ8NFG4 579 aa13.41□□□□□ -0.26
SPTBN2-201ENST00000309996 IL1RL2Q9HB29 575 aa13.41□□□□□ -0.26
SPTBN2-201ENST00000309996 AIM2O14862 343 aa13.41□□□□□ -0.26
SPTBN2-201ENST00000309996 PDGFRBP09619 1106 aa13.41□□□□□ -0.26
SPTBN2-201ENST00000309996 ZNF579Q8NAF0 562 aaKnown RBP13.41□□□□□ -0.26
SPTBN2-201ENST00000309996 USP17L15C9J2P7 530 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 USP17L13C9JLJ4 530 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 USP17L11C9JVI0 530 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 USP17L18D6R9N7 530 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 USP17L22D6RA61 530 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 USP17L17D6RBQ6 530 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 USP17L19D6RCP7 530 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 USP17L20D6RJB6 530 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 PCNAP12004 261 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 USP17L24Q0WX57 530 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 USP17L6PQ6QN14 398 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 CNPY4Q8N129 248 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 KLHL31Q9H511 634 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 UVRAGQ9P2Y5 699 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 PLA2G4CQ9UP65 541 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 ARL2BPQ9Y2Y0 163 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 NPC1L1Q9UHC9 1359 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 PFKFB3Q16875 520 aaPredicted RBP13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 ATL2Q8NHH9 583 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 C18orf8Q96DM3 657 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 CHRM3P20309 590 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 NOS3P29474 1203 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 NPEPPSP55786 919 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 EZH2Q15910 746 aaKnown RBP13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 PPP1R18Q6NYC8 613 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 KCNK16Q96T55 309 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 TDRD3Q9H7E2 651 aaKnown RBP13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 PCDHB12Q9Y5F1 795 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 KLC1Q07866 573 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 SLC25A41Q8N5S1 370 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 USP33Q8TEY7 942 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 OSCP1Q8WVF1 389 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 MAGED4Q96JG8 741 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 GPR101Q96P66 508 aaPredicted RBP13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 ARHGEF26Q96DR7 871 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 WNK4Q96J92 1243 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 KIFC1Q9BW19 673 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 V9GYQ6 96 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 E9PBE3 544 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 KCNA3P22001 575 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 KCNK10P57789 538 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 SGCGQ13326 291 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 RAB6BQ9NRW1 208 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 LIMA1Q9UHB6 759 aaKnown RBP13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 NCKAP1Q9Y2A7 1128 aa13.4□□□□□ -0.26
SPTBN2-201ENST00000309996 KLHL2O95198 593 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 FGFR1P11362 822 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 SCP2P22307 547 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 CYP2C19P33261 490 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 TERF2Q15554 542 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 USP13Q92995 863 aaPredicted RBP13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 EIF2AK1Q9BQI3 630 aaKnown RBP13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 MARCOQ9UEW3 520 aaPredicted RBP13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 ZBTB1Q9Y2K1 713 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 DLGAP3O95886 979 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 CSNK2BP67870 215 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 ZNF200P98182 395 aaPredicted RBP13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 RFFLQ8WZ73 363 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 TRIT1Q9H3H1 467 aaKnown RBP13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 C10orf88Q9H8K7 445 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 GGT7Q9UJ14 662 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 DNMT1P26358 1616 aaKnown RBP13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 PALB2Q86YC2 1186 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 CFAP74Q9C0B2 1584 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 IFRD1O00458 451 aaPredicted RBP13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 RRM2P31350 389 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 CYP24A1Q07973 514 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 LAMC2Q13753 1193 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 CNDP1Q96KN2 507 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 ECSITQ9BQ95 431 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 PCMTD2Q9NV79 361 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 MYO5CQ9NQX4 1742 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 CELF2O95319 508 aaKnown RBP13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 MICU2Q8IYU8 434 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 RNPC3Q96LT9 517 aaKnown RBP13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 RANBP17Q9H2T7 1088 aaKnown RBP13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 KDM5DQ9BY66 1539 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 ALBP02768 609 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 MMRN1Q13201 1228 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 PROSER3Q2NL68 480 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 TTC39BQ5VTQ0 682 aaPredicted RBP13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 RUBCNQ92622 972 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 GMCL1Q96IK5 515 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 ERAP1Q9NZ08 941 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 PITPNM2Q9BZ72 1349 aa13.39□□□□□ -0.27
SPTBN2-201ENST00000309996 DHX40Q8IX18 779 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms