RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PRELID2Q8N945 189 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 EIF1ADQ8N9N8 165 aaKnown RBP22.53■■□□□ 1.2
ATG4D-201ENST00000309469 DDX27Q96GQ7 796 aaKnown RBP22.53■■□□□ 1.2
ATG4D-201ENST00000309469 RNF19AQ9NV58 838 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 KLK14Q9P0G3 267 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 LCMT1Q9UIC8 334 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 HPCAL4Q9UM19 191 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.53■■□□□ 1.2
ATG4D-201ENST00000309469 SNX9Q9Y5X1 595 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 CDY2AQ9Y6F7 541 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 PSTPIP1O43586 416 aa22.52■■□□□ 1.2
ATG4D-201ENST00000309469 PHF2O75151 1096 aa22.52■■□□□ 1.2
ATG4D-201ENST00000309469 HMGCRP04035 888 aa22.52■■□□□ 1.2
ATG4D-201ENST00000309469 SGO2Q562F6 1265 aa22.52■■□□□ 1.2
ATG4D-201ENST00000309469 DAB2IPQ5VWQ8 1189 aa22.52■■□□□ 1.2
ATG4D-201ENST00000309469 C9orf57Q5W0N0 161 aa22.52■■□□□ 1.2
ATG4D-201ENST00000309469 DCUN1D2Q6PH85 259 aa22.52■■□□□ 1.2
ATG4D-201ENST00000309469 C3orf20Q8ND61 904 aa22.52■■□□□ 1.2
ATG4D-201ENST00000309469 MCEEQ96PE7 176 aa22.52■■□□□ 1.2
ATG4D-201ENST00000309469 NT5C1AQ9BXI3 368 aa22.52■■□□□ 1.2
ATG4D-201ENST00000309469 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.52■■□□□ 1.2
ATG4D-201ENST00000309469 RNF186Q9NXI6 227 aa22.52■■□□□ 1.2
ATG4D-201ENST00000309469 MTUS1Q9ULD2 1270 aa22.52■■□□□ 1.2
ATG4D-201ENST00000309469 USTQ9Y2C2 406 aa22.52■■□□□ 1.2
ATG4D-201ENST00000309469 IPPQ9Y573 584 aa22.52■■□□□ 1.2
ATG4D-201ENST00000309469 TRPV2Q9Y5S1 764 aa22.52■■□□□ 1.2
ATG4D-201ENST00000309469 O00370 1275 aa22.51■■□□□ 1.19
ATG4D-201ENST00000309469 CD4P01730 458 aa22.51■■□□□ 1.19
ATG4D-201ENST00000309469 KCNE1P15382 129 aa22.51■■□□□ 1.19
ATG4D-201ENST00000309469 CCND3P30281 292 aaPredicted RBP22.51■■□□□ 1.19
ATG4D-201ENST00000309469 CHRNA3P32297 505 aa22.51■■□□□ 1.19
ATG4D-201ENST00000309469 DR1Q01658 176 aa22.51■■□□□ 1.19
ATG4D-201ENST00000309469 NNTQ13423 1086 aa22.51■■□□□ 1.19
ATG4D-201ENST00000309469 CUL1Q13616 776 aa22.51■■□□□ 1.19
ATG4D-201ENST00000309469 FAM47CQ5HY64 1035 aa22.51■■□□□ 1.19
ATG4D-201ENST00000309469 SMG8Q8ND04 991 aaKnown RBP22.51■■□□□ 1.19
ATG4D-201ENST00000309469 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.51■■□□□ 1.19
ATG4D-201ENST00000309469 CITO14578 2027 aa22.51■■□□□ 1.19
ATG4D-201ENST00000309469 TCRBV7S2A1N4TA0A589 114 aa22.51■■□□□ 1.19
ATG4D-201ENST00000309469 ATF7P17544 494 aaPredicted RBP22.51■■□□□ 1.19
ATG4D-201ENST00000309469 TAS2R40P59535 323 aa22.51■■□□□ 1.19
ATG4D-201ENST00000309469 TWF2Q6IBS0 349 aaKnown RBP22.51■■□□□ 1.19
ATG4D-201ENST00000309469 REM2Q8IYK8 340 aaPredicted RBP22.51■■□□□ 1.19
ATG4D-201ENST00000309469 C18orf8Q96DM3 657 aa22.51■■□□□ 1.19
ATG4D-201ENST00000309469 CAPNS2Q96L46 248 aa22.51■■□□□ 1.19
ATG4D-201ENST00000309469 PRDM10Q9NQV6 1147 aa22.51■■□□□ 1.19
ATG4D-201ENST00000309469 RALGAPA2Q2PPJ7 1873 aa22.51■■□□□ 1.19
ATG4D-201ENST00000309469 FSCN2O14926 492 aa22.5■■□□□ 1.19
ATG4D-201ENST00000309469 RARAP10276 462 aa22.5■■□□□ 1.19
ATG4D-201ENST00000309469 PRKAR2AP13861 404 aaKnown RBP22.5■■□□□ 1.19
ATG4D-201ENST00000309469 ELNP15502 786 aa22.5■■□□□ 1.19
ATG4D-201ENST00000309469 DHX34Q14147 1143 aaKnown RBP22.5■■□□□ 1.19
ATG4D-201ENST00000309469 SIX1Q15475 284 aaPredicted RBP22.5■■□□□ 1.19
ATG4D-201ENST00000309469 CYP1B1Q16678 543 aa22.5■■□□□ 1.19
ATG4D-201ENST00000309469 DEFB115Q30KQ5 88 aa22.5■■□□□ 1.19
ATG4D-201ENST00000309469 SERINC5Q86VE9 423 aa22.5■■□□□ 1.19
ATG4D-201ENST00000309469 KLHDC9Q8NEP7 349 aa22.5■■□□□ 1.19
ATG4D-201ENST00000309469 WNT8BQ93098 351 aa22.5■■□□□ 1.19
ATG4D-201ENST00000309469 MAGOHBQ96A72 148 aaKnown RBP22.5■■□□□ 1.19
ATG4D-201ENST00000309469 MRPL45Q9BRJ2 306 aaKnown RBP22.5■■□□□ 1.19
ATG4D-201ENST00000309469 UTP11Q9Y3A2 253 aaKnown RBP22.5■■□□□ 1.19
ATG4D-201ENST00000309469 TRIP12Q14669 1992 aaPredicted RBP22.5■■□□□ 1.19
ATG4D-201ENST00000309469 M0QYV0 167 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 PIRO00625 290 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 XPOTO43592 962 aaKnown RBP22.49■■□□□ 1.19
ATG4D-201ENST00000309469 ASGR1P07306 291 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 FAM153BP0C7A2 387 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 GPD2P43304 727 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 SSR1P43307 286 aaKnown RBP22.49■■□□□ 1.19
ATG4D-201ENST00000309469 ZNF252P-AS1Q0IIN9 211 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 KCNA10Q16322 511 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 FAM153CQ494X1 144 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 DPH6Q7L8W6 267 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 SEC14L1Q92503 715 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 CPXM1Q96SM3 734 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 TJP2Q9UDY2 1190 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 FAM153AQ9UHL3 310 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 FAM187AA6NFU0 413 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 SIGLEC16A6NMB1 481 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 H3BQF6 201 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 TOMM70O94826 608 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 PSMC1P62191 440 aaKnown RBP22.49■■□□□ 1.19
ATG4D-201ENST00000309469 OGDHQ02218 1023 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 LCLAT1Q6UWP7 414 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 DDX42Q86XP3 938 aaKnown RBP eCLIP22.49■■□□□ 1.19
ATG4D-201ENST00000309469 KATNAL2Q8IYT4 538 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 ARRDC4Q8NCT1 418 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 RAB17Q9H0T7 212 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 SYNCQ9H7C4 482 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 WDR35Q9P2L0 1181 aa22.49■■□□□ 1.19
ATG4D-201ENST00000309469 GOLGA8SH3BPF8 625 aa22.48■■□□□ 1.19
ATG4D-201ENST00000309469 RPS6KA5O75582 802 aa22.48■■□□□ 1.19
ATG4D-201ENST00000309469 MYCNP04198 464 aaPredicted RBP22.48■■□□□ 1.19
ATG4D-201ENST00000309469 GSCP56915 257 aaPredicted RBP22.48■■□□□ 1.19
ATG4D-201ENST00000309469 PIGHQ14442 188 aaPredicted RBP22.48■■□□□ 1.19
ATG4D-201ENST00000309469 HLTFQ14527 1009 aaKnown RBP eCLIP22.48■■□□□ 1.19
ATG4D-201ENST00000309469 ZNF268Q14587 947 aaPredicted RBP22.48■■□□□ 1.19
ATG4D-201ENST00000309469 CCSAPQ6IQ19 270 aaPredicted RBP22.48■■□□□ 1.19
ATG4D-201ENST00000309469 RPAINQ86UA6 219 aa22.48■■□□□ 1.19
ATG4D-201ENST00000309469 SESTD1Q86VW0 696 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms