RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 NAT10Q9H0A0 1025 aaKnown RBP11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ZCWPW1Q9H0M4 648 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 XYLT2Q9H1B5 865 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ADAM7Q9H2U9 754 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SMYD3Q9H7B4 428 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 RAB20Q9NX57 234 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CDH9Q9ULB4 789 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 POLIQ9UNA4 740 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 USP15Q9Y4E8 981 aaPredicted RBP11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 DOCK6Q96HP0 2047 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 MTMR11A4FU01 709 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 GRXCR2A6NFK2 248 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 A8MXQ7 604 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 P4HA2O15460 535 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 RFPL2O75678 378 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ABLIM3O94929 683 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 AFPP02771 609 aaKnown RBP11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TPM2P07951 284 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 FAM163BP0C2L3 166 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 IL9P15248 144 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ACAT1P24752 427 aaKnown RBP11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 MCCD1P59942 119 aaPredicted RBP11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 KCNH2Q12809 1159 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CBX2Q14781 532 aaPredicted RBP11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 MAPRE1Q15691 268 aaKnown RBP11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 NFE2Q16621 373 aaPredicted RBP11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ATAT1Q5SQI0 421 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SPOPLQ6IQ16 392 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 C11orf57Q6ZUT1 292 aaPredicted RBP11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 OSTM1Q86WC4 334 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 KBTBD7Q8WVZ9 684 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TMEM209Q96SK2 561 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SEPT5Q99719 369 aaPredicted RBP11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PRKD2Q9BZL6 878 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 NIF3L1Q9GZT8 377 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 DNAJC25Q9H1X3 360 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 S1PR5Q9H228 398 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ABI2Q9NYB9 513 aaPredicted RBP11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 NFE2L3Q9Y4A8 694 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 INSL5Q9Y5Q6 135 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 EYSQ5T1H1 3165 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 MYO16Q9Y6X6 1858 aa11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ZNF638Q14966 1978 aaKnown RBP11.76□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 OBSL1O75147 1896 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PES1O00541 588 aaKnown RBP11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 GABRDO14764 452 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CCL16O15467 120 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PRKCSHP14314 528 aaPredicted RBP11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 GNL1P36915 607 aaPredicted RBP11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 RAP1GAPP47736 663 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ALDH1A3P47895 512 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PSMC1P62191 440 aaKnown RBP11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 YWHAEP62258 255 aaKnown RBP11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 MYL5Q02045 173 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TWF1Q12792 350 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SMAD2Q15796 467 aaKnown RBP11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 MGAT5BQ3V5L5 792 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 C4orf50Q6ZRC1 276 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 LIMS2Q7Z4I7 341 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 GPR149Q86SP6 731 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SPATA2LQ8IUW3 424 aaPredicted RBP11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TCEAL8Q8IYN2 117 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ANKRD20A12PQ8NF67 263 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ENOX1Q8TC92 643 aaKnown RBP11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 FAXDC2Q96IV6 333 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TNIP3Q96KP6 325 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 RTP3Q9BQQ7 232 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 MRPL45Q9BRJ2 306 aaKnown RBP11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 YIPF1Q9Y548 306 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PCDHB5Q9Y5E4 795 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 GREB1Q4ZG55 1949 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 DENND4CQ5VZ89 1909 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ATP8B3O60423 1300 aa11.75□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 COL6A3P12111 3177 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SYCE3A1L190 88 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 KCNJ18B7U540 433 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PMM2O15305 246 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 POU2F2P09086 479 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PDGFRBP09619 1106 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 WEE2P0C1S8 567 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TBXAS1P24557 533 aaPredicted RBP11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ASPAP45381 313 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TUFMP49411 452 aaKnown RBP11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 EPHB3P54753 998 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CYP27A1Q02318 531 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 DUSP4Q13115 394 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 KCNJ12Q14500 433 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 VEPH1Q14D04 833 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 MAN2A1Q16706 1144 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ANO6Q4KMQ2 910 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 HSP90AA4PQ58FG1 418 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 IQCEQ6IPM2 695 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TTC39CQ8N584 583 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 FAM200AQ8TCP9 573 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SUSD6Q92537 303 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ELMO3Q96BJ8 720 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 NT5C1BQ96P26 610 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 MED15Q96RN5 788 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PHF7Q9BWX1 381 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms