RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 SYCE1Q8N0S2 351 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 PDCL2Q8N4E4 241 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 MYRIPQ8NFW9 859 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 ZNF564Q8TBZ8 553 aaPredicted RBP13.79□□□□□ -0.2
CCDC7-202ENST00000302316 TMEM39AQ9NV64 488 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 CDC23Q9UJX2 597 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 TBX21Q9UL17 535 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.79□□□□□ -0.2
CCDC7-202ENST00000302316 SAR1BQ9Y6B6 198 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 M0QYV0 167 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 O00370 1275 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 ENPP3O14638 875 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 BUB1BO60566 1050 aaPredicted RBP13.79□□□□□ -0.2
CCDC7-202ENST00000302316 CLTBP09497 229 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 RRM1P23921 792 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 CDH5P33151 784 aaPredicted RBP13.79□□□□□ -0.2
CCDC7-202ENST00000302316 GNL1P36915 607 aaPredicted RBP13.79□□□□□ -0.2
CCDC7-202ENST00000302316 HADHBP55084 474 aaKnown RBP13.79□□□□□ -0.2
CCDC7-202ENST00000302316 C1QBPQ07021 282 aaKnown RBP13.79□□□□□ -0.2
CCDC7-202ENST00000302316 TUBB2AQ13885 445 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 NOMO2Q5JPE7 1267 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 LIN9Q5TKA1 542 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 DSTYKQ6XUX3 929 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 LIMS2Q7Z4I7 341 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 DEFB128Q7Z7B8 93 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 C12orf29Q8N999 325 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 DDX27Q96GQ7 796 aaKnown RBP13.79□□□□□ -0.2
CCDC7-202ENST00000302316 VCPIP1Q96JH7 1222 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 CALR3Q96L12 384 aaKnown RBP13.79□□□□□ -0.2
CCDC7-202ENST00000302316 UROC1Q96N76 676 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 TUBB2BQ9BVA1 445 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 DNAI2Q9GZS0 605 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 LHX5Q9H2C1 402 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 DPEP3Q9H4B8 488 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 AVENQ9NQS1 362 aaPredicted RBP13.79□□□□□ -0.2
CCDC7-202ENST00000302316 UVRAGQ9P2Y5 699 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 MYH10P35580 1976 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 SCN5AQ14524 2016 aa13.79□□□□□ -0.2
CCDC7-202ENST00000302316 HCRTO43612 131 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 SLU7O95391 586 aaKnown RBP13.78□□□□□ -0.2
CCDC7-202ENST00000302316 CXCL10P02778 98 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 PDGFRBP09619 1106 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 MMP8P22894 467 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 WARSP23381 471 aaKnown RBP13.78□□□□□ -0.2
CCDC7-202ENST00000302316 STILQ15468 1287 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 CNGA2Q16280 664 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 LRRC26Q2I0M4 334 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 TCTN1Q2MV58 587 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 MEI1Q5TIA1 1274 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 FAM43BQ6ZT52 329 aaPredicted RBP13.78□□□□□ -0.2
CCDC7-202ENST00000302316 PHLDB2Q86SQ0 1253 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 ABI1Q8IZP0 508 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 SENP8Q96LD8 212 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 ELAC1Q9H777 363 aaKnown RBP13.78□□□□□ -0.2
CCDC7-202ENST00000302316 TSPAN16Q9UKR8 245 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 LRFN2Q9ULH4 789 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 SNX12Q9UMY4 172 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 HYOU1Q9Y4L1 999 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 PCDHB7Q9Y5E2 793 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 B3GAT3O94766 335 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 MTA2O94776 668 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 CALB1P05937 261 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 DNA2P51530 1060 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 PTPROQ16827 1216 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 PAN2Q504Q3 1202 aaKnown RBP13.78□□□□□ -0.2
CCDC7-202ENST00000302316 LLGL2Q6P1M3 1020 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 PEX26Q7Z412 305 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 SLFN11Q7Z7L1 901 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 ERICH1Q86X53 443 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 WDTC1Q8N5D0 677 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 TLR10Q9BXR5 811 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 FAM49BQ9NUQ9 324 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 PACSIN2Q9UNF0 486 aaPredicted RBP13.78□□□□□ -0.2
CCDC7-202ENST00000302316 STXBP5LQ9Y2K9 1186 aa13.78□□□□□ -0.2
CCDC7-202ENST00000302316 SRGAP2O75044 1071 aa13.77□□□□□ -0.21
CCDC7-202ENST00000302316 LMO2P25791 158 aa13.77□□□□□ -0.21
CCDC7-202ENST00000302316 AARSP49588 968 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCDC7-202ENST00000302316 RNASELQ05823 741 aaKnown RBP13.77□□□□□ -0.21
CCDC7-202ENST00000302316 PTP4A2Q12974 167 aa13.77□□□□□ -0.21
CCDC7-202ENST00000302316 GOLGA7BQ2TAP0 167 aa13.77□□□□□ -0.21
CCDC7-202ENST00000302316 PPP1R26Q5T8A7 1209 aaPredicted RBP13.77□□□□□ -0.21
CCDC7-202ENST00000302316 WSCD1Q658N2 575 aa13.77□□□□□ -0.21
CCDC7-202ENST00000302316 LCLAT1Q6UWP7 414 aa13.77□□□□□ -0.21
CCDC7-202ENST00000302316 NECAB2Q7Z6G3 386 aa13.77□□□□□ -0.21
CCDC7-202ENST00000302316 OSTM1Q86WC4 334 aa13.77□□□□□ -0.21
CCDC7-202ENST00000302316 HASPINQ8TF76 798 aa13.77□□□□□ -0.21
CCDC7-202ENST00000302316 TNIP3Q96KP6 325 aa13.77□□□□□ -0.21
CCDC7-202ENST00000302316 PSMB7Q99436 277 aa13.77□□□□□ -0.21
CCDC7-202ENST00000302316 CARD6Q9BX69 1037 aa13.77□□□□□ -0.21
CCDC7-202ENST00000302316 KANSL3Q9P2N6 904 aa13.77□□□□□ -0.21
CCDC7-202ENST00000302316 SCINQ9Y6U3 715 aa13.77□□□□□ -0.21
CCDC7-202ENST00000302316 TET1Q8NFU7 2136 aa13.77□□□□□ -0.21
CCDC7-202ENST00000302316 UQCRHLA0A096LP55 91 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 TMEM110-MUSTN1A8MSY1 372 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 UQCRHP07919 91 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 ODC1P11926 461 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 TERF1P54274 439 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 WHAMMP3Q1A5X7 153 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 TIGD5Q53EQ6 642 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 C11orf63Q6NUN7 778 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms