RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 FAM53CQ9NYF3 392 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 SMARCAL1Q9NZC9 954 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 DDX20Q9UHI6 824 aaKnown RBP12.74□□□□□ -0.37
TPM3-202ENST00000302206 ANAPC7Q9UJX3 599 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 STRIP2Q9ULQ0 834 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 IPPQ9Y573 584 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 SMIM28A0A1B0GU29 152 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 TCRBV5S1A1TA0A578 114 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 TMEM110-MUSTN1A8MSY1 372 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 MYO1FO00160 1098 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 PIRO00625 290 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 SPOPO43791 374 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 CAND2O75155 1236 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 RPS6KA5O75582 802 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 ELNP15502 786 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 RAP1GAPP47736 663 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 GUCY2FP51841 1108 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 CDH8P55286 799 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 PTK7Q13308 1070 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 MAMLD1Q13495 774 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 ZNF394Q53GI3 561 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 FAM26DQ5JW98 314 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 BEND6Q5SZJ8 279 aaPredicted RBP12.73□□□□□ -0.37
TPM3-202ENST00000302206 DCAF12L1Q5VU92 463 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 C9orf57Q5W0N0 161 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 RNF180Q86T96 592 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 UNC93AQ86WB7 457 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 ERICH1Q86X53 443 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 PASD1Q8IV76 773 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 WDTC1Q8N5D0 677 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 EIF1ADQ8N9N8 165 aaKnown RBP12.73□□□□□ -0.37
TPM3-202ENST00000302206 SMG8Q8ND04 991 aaKnown RBP12.73□□□□□ -0.37
TPM3-202ENST00000302206 FEZF2Q8TBJ5 459 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 ALG3Q92685 438 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 RNPC3Q96LT9 517 aaKnown RBP12.73□□□□□ -0.37
TPM3-202ENST00000302206 ZNF560Q96MR9 790 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 TRAIPQ9BWF2 469 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 PLVAPQ9BX97 442 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 NT5C1AQ9BXI3 368 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 DNAI2Q9GZS0 605 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 SLITRK6Q9H5Y7 841 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 GDAP2Q9NXN4 497 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 STIM2Q9P246 746 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 WDR35Q9P2L0 1181 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 IP6K2Q9UHH9 426 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 SQORQ9Y6N5 450 aa12.73□□□□□ -0.37
TPM3-202ENST00000302206 GRIN2DO15399 1336 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 MOXD2PA6NHM9 499 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 KRIT1O00522 736 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 GPR182O15218 404 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 CHRNA1P02708 482 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 CD19P15391 556 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 CAPN2P17655 700 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 LRPAP1P30533 357 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 RWDD2BP57060 319 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 PTGISQ16647 500 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 LONRF2Q1L5Z9 754 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 SGO2Q562F6 1265 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 FAM47CQ5HY64 1035 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 SEL1L2Q5TEA6 688 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 TWF2Q6IBS0 349 aaKnown RBP12.72□□□□□ -0.37
TPM3-202ENST00000302206 DENND1BQ6P3S1 775 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 CCNI2Q6ZMN8 369 aaPredicted RBP12.72□□□□□ -0.37
TPM3-202ENST00000302206 LIMS2Q7Z4I7 341 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 C3orf20Q8ND61 904 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 C1orf131Q8NDD1 294 aaKnown RBP12.72□□□□□ -0.37
TPM3-202ENST00000302206 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.72□□□□□ -0.37
TPM3-202ENST00000302206 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.72□□□□□ -0.371e-8■■■■■ 76.2
TPM3-202ENST00000302206 COL25A1Q9BXS0 654 aaPredicted RBP12.72□□□□□ -0.37
TPM3-202ENST00000302206 MIS12Q9H081 205 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.72□□□□□ -0.37
TPM3-202ENST00000302206 TUBGCP4Q9UGJ1 667 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 ST3GAL5Q9UNP4 418 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.72□□□□□ -0.37
TPM3-202ENST00000302206 HES2Q9Y543 173 aa12.72□□□□□ -0.37
TPM3-202ENST00000302206 UNC80Q8N2C7 3258 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 GOLGA6L10A0A0M3HER8 536 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 TMEM191CA6NGB0 347 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 BHMG1C9JSJ3 638 aaPredicted RBP12.71□□□□□ -0.37
TPM3-202ENST00000302206 O00370 1275 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 PSTPIP1O43586 416 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 FGGP02679 453 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 SETSIPP0DME0 302 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 AKAP5P24588 427 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 GABRB2P47870 512 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 RAB27AP51159 221 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 NDST1P52848 882 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 ZNF268Q14587 947 aaPredicted RBP12.71□□□□□ -0.37
TPM3-202ENST00000302206 PTPROQ16827 1216 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 SV2CQ496J9 727 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 PPP1R15BQ5SWA1 713 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 DNAJC24Q6P3W2 148 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 LCLAT1Q6UWP7 414 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 MRPL10Q7Z7H8 261 aaKnown RBP12.71□□□□□ -0.37
TPM3-202ENST00000302206 IFT20Q8IY31 132 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 MAIP1Q8WWC4 291 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 KRT35Q92764 455 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 C18orf25Q96B23 403 aaPredicted RBP12.71□□□□□ -0.37
TPM3-202ENST00000302206 BTBD6Q96KE9 485 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms