RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.16■□□□□ 0.02
CDT1-201ENST00000301019 ABCB11O95342 1321 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 USP17L5A8MUK1 530 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 MED24O75448 989 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 BMP3P12645 472 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 CLCN2P51788 898 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 SNAP25P60880 206 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 PPP2R5EQ16537 467 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 ARSHQ5FYA8 562 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 FAM196AQ6ZSG2 479 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 C7orf43Q8WVR3 580 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 NCSTNQ92542 709 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 OXNAD1Q96HP4 312 aaPredicted RBP15.16■□□□□ 0.02
CDT1-201ENST00000301019 PCDHB18PQ96TA0 734 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 OSBPL8Q9BZF1 889 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 XPNPEP1Q9NQW7 623 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 CCNL1Q9UK58 526 aaPredicted RBP15.16■□□□□ 0.02
CDT1-201ENST00000301019 EFR3BQ9Y2G0 817 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 ZMYM2Q9UBW7 1377 aa15.16■□□□□ 0.02
CDT1-201ENST00000301019 TFAP2AP05549 437 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 RARBP10826 455 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 RAG1P15918 1043 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 GNA11P29992 359 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 SLC5A2P31639 672 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 OXCT1P55809 520 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 TFDP1Q14186 410 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 SIX1Q15475 284 aaPredicted RBP15.15■□□□□ 0.02
CDT1-201ENST00000301019 ATP13A4Q4VNC1 1196 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 CMPK2Q5EBM0 449 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 RSPH3Q86UC2 560 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 AGPAT1Q99943 283 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 AKAP11Q9UKA4 1901 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 EP400Q96L91 3159 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 C6orf222P0C671 652 aaPredicted RBP15.15■□□□□ 0.02
CDT1-201ENST00000301019 GTF2H1P32780 548 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 GCLMP48507 274 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 DLG4P78352 724 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 TLR1Q15399 786 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 C6orf52Q5T4I8 152 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 CYFIP1Q7L576 1253 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 DENND1AQ8TEH3 1009 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 SPZ1Q9BXG8 430 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 BHMT2Q9H2M3 363 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 SAE1Q9UBE0 346 aaPredicted RBP15.15■□□□□ 0.02
CDT1-201ENST00000301019 ANAPC7Q9UJX3 599 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 A8MU76 341 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 CYB561D2O14569 222 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 SLURP2P0DP57 97 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 ITIH2P19823 946 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 CHN2P52757 468 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 NRLP54845 237 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 GPC5P78333 572 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 EML3Q32P44 896 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 DENND5BQ6ZUT9 1274 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 SLC47A2Q86VL8 602 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 STKLD1Q8NE28 680 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 PPP1R36Q96LQ0 422 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 TRAIPQ9BWF2 469 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 PCDH18Q9HCL0 1135 aa15.15■□□□□ 0.02
CDT1-201ENST00000301019 MYH14Q7Z406 1995 aaKnown RBP15.15■□□□□ 0.02
CDT1-201ENST00000301019 A0A0A6YYK5 440 aaPredicted RBP15.14■□□□□ 0.01
CDT1-201ENST00000301019 TMEM247A6NEH6 219 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 BCRP11274 1271 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 RGS2P41220 211 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 HALP42357 657 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 SERPINB8P50452 374 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 JAM2P57087 298 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 DYNLT1P63172 113 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 CC2D2BQ6DHV5 1058 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 PTAR1Q7Z6K3 402 aaPredicted RBP15.14■□□□□ 0.01
CDT1-201ENST00000301019 FAM81BQ96LP2 452 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 MTMR9Q96QG7 549 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 MMP19Q99542 508 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 EBF4Q9BQW3 602 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 GINM1Q9NU53 330 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 INPP5FQ9Y2H2 1132 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 ADCY6O43306 1168 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 PDE8AO60658 829 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 ZC3H11AO75152 810 aaKnown RBP eCLIP15.14■□□□□ 0.012e-6■■■□□ 15
CDT1-201ENST00000301019 TOP3BO95985 862 aaKnown RBP15.14■□□□□ 0.01
CDT1-201ENST00000301019 GSTT2P0CG29 244 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 GSTT2BP0CG30 244 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 UQCRBP14927 111 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 IVDP26440 423 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 ARHGAP4P98171 946 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 MAP3K10Q02779 954 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 GPS1Q13098 491 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 RASA3Q14644 834 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 ACAD11Q709F0 780 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 HPS6Q86YV9 775 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 ARHGEF19Q8IW93 802 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 GABPB2Q8TAK5 448 aaPredicted RBP15.14■□□□□ 0.01
CDT1-201ENST00000301019 AGR3Q8TD06 166 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 HAS1Q92839 578 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 INTS2Q9H0H0 1204 aaKnown RBP15.14■□□□□ 0.01
CDT1-201ENST00000301019 UNC45AQ9H3U1 944 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 CNTNAP4Q9C0A0 1308 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 ZNF831Q5JPB2 1677 aa15.14■□□□□ 0.01
CDT1-201ENST00000301019 RREB1Q92766 1687 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 E2F8A0AVK6 867 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms