RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 PCDHB4Q9Y5E5 795 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 ABLIM1O14639 778 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 RPS6KA4O75676 772 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 GSTA2P09210 222 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 OCRLQ01968 901 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.42■□□□□ 0.06
COL6A2-201ENST00000300527 XKR9Q5GH70 373 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 RIPOR1Q6ZS17 1223 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 PYDC1Q8WXC3 89 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 USP6NLQ92738 828 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 CYP4F11Q9HBI6 524 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 SENP1Q9P0U3 644 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 SIGLEC16A6NMB1 481 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 LIASO43766 372 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 PYGBP11216 843 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 IL1R1P14778 569 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 ADRA2BP18089 450 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 KLRC2P26717 231 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 ECE1P42892 770 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 GPX6P59796 221 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 CDK16Q00536 496 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 MSS51Q4VC12 460 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 TXNRD3NBQ6F5E7 133 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 RASSF3Q86WH2 238 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 ARHGAP24Q8N264 748 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 SHKBP1Q8TBC3 707 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 TEKT1Q969V4 418 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 MKL1Q969V6 931 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 RBM41Q96IZ5 413 aaKnown RBP15.41■□□□□ 0.06
COL6A2-201ENST00000300527 RHBDL2Q9NX52 303 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 STX18Q9P2W9 335 aaKnown RBP15.41■□□□□ 0.06
COL6A2-201ENST00000300527 IVNS1ABPQ9Y6Y0 642 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 A6NJR5 290 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 CREB3O43889 395 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 DSG3P32926 999 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 SLC1A1P43005 524 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 TMPRSS15P98073 1019 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 SMC1BQ8NDV3 1235 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 OXNAD1Q96HP4 312 aaPredicted RBP15.41■□□□□ 0.06
COL6A2-201ENST00000300527 CCDC17Q96LX7 622 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 ACAP3Q96P50 834 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 RANBP17Q9H2T7 1088 aaKnown RBP15.41■□□□□ 0.06
COL6A2-201ENST00000300527 CIITAP33076 1130 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 SCNN1BP51168 640 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 DSG1Q02413 1049 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 KCNT1Q5JUK3 1230 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 FNBP1LQ5T0N5 605 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 RBM15BQ8NDT2 890 aaKnown RBP15.41■□□□□ 0.06
COL6A2-201ENST00000300527 DDX1Q92499 740 aaKnown RBP15.41■□□□□ 0.06
COL6A2-201ENST00000300527 KAT6AQ92794 2004 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 CFAP36Q96G28 342 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 FAM163AQ96GL9 167 aaPredicted RBP15.41■□□□□ 0.06
COL6A2-201ENST00000300527 LNPEPQ9UIQ6 1025 aa15.41■□□□□ 0.06
COL6A2-201ENST00000300527 DENND3A2RUS2 1198 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 HNRNPDLO14979 420 aaKnown RBP15.4■□□□□ 0.06
COL6A2-201ENST00000300527 FAM155BO75949 473 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 POTEJP0CG39 1038 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 ANPEPP15144 967 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 PHBP35232 272 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 PRPF39Q86UA1 669 aaKnown RBP15.4■□□□□ 0.06
COL6A2-201ENST00000300527 SLC9A9Q8IVB4 645 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 POU5F2Q8N7G0 328 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 SLC26A7Q8TE54 656 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 VTI1AQ96AJ9 217 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 MTBPQ96DY7 904 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 PTCD3Q96EY7 689 aaKnown RBP15.4■□□□□ 0.06
COL6A2-201ENST00000300527 TRAPPC9Q96Q05 1148 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 ASCC2Q9H1I8 757 aaPredicted RBP15.4■□□□□ 0.06
COL6A2-201ENST00000300527 PDP2Q9P2J9 529 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 PPM1HQ9ULR3 514 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 MYH11P35749 1972 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 E5RJQ4 531 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 F8VP50 259 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 CYP1A1P04798 512 aaPredicted RBP15.4■□□□□ 0.06
COL6A2-201ENST00000300527 INHBAP08476 426 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 ABHD2P08910 425 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 KLF1Q13351 362 aaPredicted RBP15.4■□□□□ 0.06
COL6A2-201ENST00000300527 NFIL3Q16649 462 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 WDR44Q5JSH3 913 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 SCUBE1Q8IWY4 988 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 RSAD2Q8WXG1 361 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 DBNDD1Q9H9R9 158 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 CLIC5Q9NZA1 410 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 PHLPP1O60346 1717 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 TRAFD1O14545 582 aaPredicted RBP15.4■□□□□ 0.06
COL6A2-201ENST00000300527 ECE2O60344 883 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 GRIN3BO60391 1043 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 FAAP100Q0VG06 881 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 PTK7Q13308 1070 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 DYNC1I2Q13409 638 aaKnown RBP15.4■□□□□ 0.06
COL6A2-201ENST00000300527 LPCAT4Q643R3 524 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 PPP1R14CQ8TAE6 165 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 MCEEQ96PE7 176 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 WDR11Q9BZH6 1224 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 VCX3BQ9H321 246 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 EBF3Q9H4W6 596 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 VCX3AQ9NNX9 186 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 ZHX2Q9Y6X8 837 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 PLIN4Q96Q06 1357 aa15.4■□□□□ 0.06
COL6A2-201ENST00000300527 UBE4BO95155 1302 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms