RNA–Protein interactions for RNA: ENST00000300305.7

RUNX1-201, Transcript of runt related transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX1, Length 6,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-201ENST00000300305 GSSP48637 474 aa16.96■□□□□ 0.31
RUNX1-201ENST00000300305 TTC39BQ5VTQ0 682 aaPredicted RBP16.96■□□□□ 0.31
RUNX1-201ENST00000300305 CCDC103Q8IW40 242 aa16.96■□□□□ 0.31
RUNX1-201ENST00000300305 MICALL2Q8IY33 904 aa16.96■□□□□ 0.31
RUNX1-201ENST00000300305 ZNF669Q96BR6 464 aaPredicted RBP16.96■□□□□ 0.31
RUNX1-201ENST00000300305 HAO1Q9UJM8 370 aa16.96■□□□□ 0.31
RUNX1-201ENST00000300305 NCAPD2Q15021 1401 aa16.96■□□□□ 0.3
RUNX1-201ENST00000300305 CSDE1O75534 798 aaKnown RBP16.95■□□□□ 0.3
RUNX1-201ENST00000300305 RAB42Q8N4Z0 105 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 NAGPAQ9UK23 515 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 PREX2Q70Z35 1606 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 YY1P25490 414 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 LSP1P33241 339 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 EPHA7Q15375 998 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 EFCAB12Q6NXP0 572 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 MTHFD1LQ6UB35 978 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 C16orf89Q6UX73 402 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 TRIM72Q6ZMU5 477 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 FOPNLQ96NB1 174 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 NPM3O75607 178 aaKnown RBP16.95■□□□□ 0.3
RUNX1-201ENST00000300305 DDX5P17844 614 aaKnown RBP16.95■□□□□ 0.3
RUNX1-201ENST00000300305 PRKCEQ02156 737 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 NSUN4Q96CB9 384 aaKnown RBP16.95■□□□□ 0.3
RUNX1-201ENST00000300305 TAF6LQ9Y6J9 622 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 NPEPPSP55786 919 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 USP6NLQ92738 828 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 STK33Q9BYT3 514 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 GEMIN8Q9NWZ8 242 aaKnown RBP16.95■□□□□ 0.3
RUNX1-201ENST00000300305 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.95■□□□□ 0.3
RUNX1-201ENST00000300305 DEAF1O75398 565 aaPredicted RBP16.95■□□□□ 0.3
RUNX1-201ENST00000300305 ITGB3P05106 788 aa16.95■□□□□ 0.3
RUNX1-201ENST00000300305 THUMPD3Q9BV44 507 aaKnown RBP16.95■□□□□ 0.3
RUNX1-201ENST00000300305 WEE1P30291 646 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 KCNK10P57789 538 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 SEMA4DQ92854 862 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 THAP2Q9H0W7 228 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 DUSP10Q9Y6W6 482 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 MAP3K10Q02779 954 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 DNAJC9Q8WXX5 260 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 SLC40A1Q9NP59 571 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 POU1F1P28069 291 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 NCALDP61601 193 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 CCNI2Q6ZMN8 369 aaPredicted RBP16.94■□□□□ 0.3
RUNX1-201ENST00000300305 MTERF3Q96E29 417 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 CPB2Q96IY4 423 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 SH3GL3Q99963 347 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 SH3BP1Q9Y3L3 701 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 M0R3G1 203 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 ALDH1A1P00352 501 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 WASHC5Q12768 1159 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 CCDC92Q53HC0 331 aaPredicted RBP16.94■□□□□ 0.3
RUNX1-201ENST00000300305 FGD2Q7Z6J4 655 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 IFNLR1Q8IU57 520 aaPredicted RBP16.94■□□□□ 0.3
RUNX1-201ENST00000300305 ANKRD49Q8WVL7 239 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 POP1Q99575 1024 aaKnown RBP16.94■□□□□ 0.3
RUNX1-201ENST00000300305 PRPF18Q99633 342 aaKnown RBP16.94■□□□□ 0.3
RUNX1-201ENST00000300305 NMRK2Q9NPI5 230 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 RUVBL2Q9Y230 463 aaKnown RBP16.94■□□□□ 0.3
RUNX1-201ENST00000300305 PRG3Q9Y2Y8 225 aaPredicted RBP16.94■□□□□ 0.3
RUNX1-201ENST00000300305 CLTCL1P53675 1640 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 ZNF609O15014 1411 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 C12orf60Q5U649 245 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 TRIM69Q86WT6 500 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 TMEM245Q9H330 911 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 GLI2P10070 1586 aa16.94■□□□□ 0.3
RUNX1-201ENST00000300305 SRGNP10124 158 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 MAPK10P53779 464 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 ABCE1P61221 599 aaKnown RBP16.93■□□□□ 0.3
RUNX1-201ENST00000300305 CEP41Q9BYV8 373 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 OSBPL8Q9BZF1 889 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.93■□□□□ 0.3
RUNX1-201ENST00000300305 LAMC1P11047 1609 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 SGPL1O95470 568 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 CYP2C19P33261 490 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 SLC1A1P43005 524 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 RPS7P62081 194 aaKnown RBP16.93■□□□□ 0.3
RUNX1-201ENST00000300305 APOBEC3FQ8IUX4 373 aaKnown RBP16.93■□□□□ 0.3
RUNX1-201ENST00000300305 MICU2Q8IYU8 434 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 GRAMD1AQ96CP6 724 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 UBP1Q9NZI7 540 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 ABCC3O15438 1527 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 CPSF4O95639 269 aaKnown RBP16.93■□□□□ 0.3
RUNX1-201ENST00000300305 CTCFP49711 727 aaPredicted RBP16.93■□□□□ 0.3
RUNX1-201ENST00000300305 RBP5P82980 135 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 TAP1Q03518 808 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 KCTD19Q17RG1 926 aaPredicted RBP16.93■□□□□ 0.3
RUNX1-201ENST00000300305 PYGMP11217 842 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 POU4F1Q01851 419 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 KLC1Q07866 573 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 ATF7IP2Q5U623 682 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 ARID3BQ8IVW6 561 aaPredicted RBP16.93■□□□□ 0.3
RUNX1-201ENST00000300305 PHF20Q9BVI0 1012 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 GPRC5CQ9NQ84 441 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 GSNP06396 782 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 ITGB6P18564 788 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 USP11P51784 963 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 TBC1D16Q8TBP0 767 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 ZC3H15Q8WU90 426 aaKnown RBP16.93■□□□□ 0.3
RUNX1-201ENST00000300305 FLT1P17948 1338 aa16.93■□□□□ 0.3
RUNX1-201ENST00000300305 PDXKO00764 312 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms