RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 CLMNQ96JQ2 1002 aa13.96□□□□□ -0.18
CASC4-201ENST00000299957 KLHL8Q9P2G9 620 aaPredicted RBP13.96□□□□□ -0.18
CASC4-201ENST00000299957 MYH6P13533 1939 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 PGK2P07205 417 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 GJB1P08034 283 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 GSTA1P08263 222 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 GSTA2P09210 222 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 ZNF200P98182 395 aaPredicted RBP13.95□□□□□ -0.18
CASC4-201ENST00000299957 PDE1CQ14123 709 aaPredicted RBP13.95□□□□□ -0.18
CASC4-201ENST00000299957 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.95□□□□□ -0.18
CASC4-201ENST00000299957 DACT2Q5SW24 774 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 MOXD1Q6UVY6 613 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 EFCAB3Q8N7B9 438 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 MIPOL1Q8TD10 442 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 PRPF31Q8WWY3 499 aaKnown RBP13.95□□□□□ -0.18
CASC4-201ENST00000299957 APOL2Q9BQE5 337 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 AGO4Q9HCK5 861 aaKnown RBP13.95□□□□□ -0.18
CASC4-201ENST00000299957 SIX2Q9NPC8 291 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 APOBEC2Q9Y235 224 aaKnown RBP13.95□□□□□ -0.18
CASC4-201ENST00000299957 FRMPD4Q14CM0 1322 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 KRT38O76015 456 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 EFTUD2Q15029 972 aaKnown RBP eCLIP13.95□□□□□ -0.18
CASC4-201ENST00000299957 RSBN1LQ6PCB5 846 aaPredicted RBP13.95□□□□□ -0.18
CASC4-201ENST00000299957 SH3BP5LQ7L8J4 393 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 ABTB1Q969K4 478 aaPredicted RBP13.95□□□□□ -0.18
CASC4-201ENST00000299957 SIK2Q9H0K1 926 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 GPC4O75487 556 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 CRCPO75575 148 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 ICAM1P05362 532 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 JAG1P78504 1218 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 CNTN2Q02246 1040 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 POU5F1BQ06416 359 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 NBPF12Q5TAG4 269 aaPredicted RBP13.95□□□□□ -0.18
CASC4-201ENST00000299957 RWDD4Q6NW29 188 aaKnown RBP13.95□□□□□ -0.18
CASC4-201ENST00000299957 CES3Q6UWW8 571 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 ENOSF1Q7L5Y1 443 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 SPATA24Q86W54 205 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 HACE1Q8IYU2 909 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 OR5B17Q8NGF7 314 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 SPATA33Q96N06 139 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 MRPL4Q9BYD3 311 aaKnown RBP13.95□□□□□ -0.18
CASC4-201ENST00000299957 DNAI2Q9GZS0 605 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 DEFB129Q9H1M3 183 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 ACAD9Q9H845 621 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 KIAA1586Q9HCI6 787 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 CISHQ9NSE2 258 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 KCNG1Q9UIX4 513 aa13.95□□□□□ -0.18
CASC4-201ENST00000299957 GOLGB1Q14789 3259 aaKnown RBP13.95□□□□□ -0.18
CASC4-201ENST00000299957 SPDYE2BA6NHP3 402 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 NVLO15381 856 aaKnown RBP13.94□□□□□ -0.18
CASC4-201ENST00000299957 SPDYE6P0CI01 402 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 SERPINB3P29508 390 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 HABP4Q5JVS0 413 aaKnown RBP13.94□□□□□ -0.18
CASC4-201ENST00000299957 PID1Q7Z2X4 250 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 MICALL2Q8IY33 904 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 CYP4X1Q8N118 509 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 ASNSD1Q9NWL6 643 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 TSR3Q9UJK0 312 aaKnown RBP13.94□□□□□ -0.18
CASC4-201ENST00000299957 ITGB3P05106 788 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 CUL3Q13618 768 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 RBBP5Q15291 538 aaKnown RBP13.94□□□□□ -0.18
CASC4-201ENST00000299957 FLAD1Q8NFF5 587 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 USP33Q8TEY7 942 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 SGF29Q96ES7 293 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 KIF12Q96FN5 646 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 KIAA1683Q9H0B3 1180 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 LRRC4Q9HBW1 653 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 FBXO6Q9NRD1 293 aaPredicted RBP13.94□□□□□ -0.18
CASC4-201ENST00000299957 ABCC6O95255 1503 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 AVILO75366 819 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 CA8P35219 290 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 SERPINB4P48594 390 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 TPD52P55327 224 aaPredicted RBP13.94□□□□□ -0.18
CASC4-201ENST00000299957 NR1H3Q13133 447 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 TFDP2Q14188 446 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 CATSPER4Q7RTX7 472 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 PRPF39Q86UA1 669 aaKnown RBP13.94□□□□□ -0.18
CASC4-201ENST00000299957 RNF148Q8N7C7 305 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 KCND2Q9NZV8 630 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 WHRNQ9P202 907 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 SLC12A6Q9UHW9 1150 aa13.94□□□□□ -0.18
CASC4-201ENST00000299957 MEI4A8MW99 385 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 EXTL3O43909 919 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 KCNA3P22001 575 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 ELK3P41970 407 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 CRADDP78560 199 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 RPS6KA2Q15349 733 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 ANKRD20A2Q5SQ80 823 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 ZBTB41Q5SVQ8 909 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 ANKRD20A1Q5TYW2 823 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 ATG16L1Q676U5 607 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 HEATR6Q6AI08 1181 aaKnown RBP13.93□□□□□ -0.18
CASC4-201ENST00000299957 NPNTQ6UXI9 565 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.93□□□□□ -0.18
CASC4-201ENST00000299957 CCDC97Q96F63 343 aaPredicted RBP13.93□□□□□ -0.18
CASC4-201ENST00000299957 POLIQ9UNA4 740 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 SMG5Q9UPR3 1016 aaKnown RBP13.93□□□□□ -0.18
CASC4-201ENST00000299957 TNFRSF8P28908 595 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 GEMIN4P57678 1058 aaKnown RBP13.93□□□□□ -0.18
CASC4-201ENST00000299957 KLC1Q07866 573 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms