RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 HMGXB4Q9UGU5 601 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 DNPEPQ9ULA0 475 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 CAPN7Q9Y6W3 813 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 FAM187AA6NFU0 413 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 GOLGA8RI6L899 631 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 CST8O60676 142 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 MSCO60682 206 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 CYP1A2P05177 515 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 C11orf63Q6NUN7 778 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 JOSD2Q8TAC2 188 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 DDX1Q92499 740 aaKnown RBP9.83□□□□□ -0.84
PRDM9-201ENST00000296682 RAPGEF5Q92565 580 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 ACAP3Q96P50 834 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 KLF6Q99612 283 aaPredicted RBP9.83□□□□□ -0.84
PRDM9-201ENST00000296682 ELAC2Q9BQ52 826 aaKnown RBP9.83□□□□□ -0.84
PRDM9-201ENST00000296682 TMBIM4Q9HC24 238 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 SNTG2Q9NY99 539 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 CACNG4Q9UBN1 327 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 DIS3Q9Y2L1 958 aaKnown RBP9.83□□□□□ -0.84
PRDM9-201ENST00000296682 ASB14A6NK59 587 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 CXCL11O14625 94 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 RARBP10826 455 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 ECHS1P30084 290 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 KRT81Q14533 505 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 FAM47EQ6ZV65 393 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 CCDC13Q8IYE1 715 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 TTC16Q8NEE8 873 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 TRIM11Q96F44 468 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 FBXL18Q96ME1 805 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 RASSF4Q9H2L5 321 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 CDC42EP4Q9H3Q1 356 aaKnown RBP9.82□□□□□ -0.84
PRDM9-201ENST00000296682 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.82□□□□□ -0.84
PRDM9-201ENST00000296682 PNMA3Q9UL41 463 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 PIN4Q9Y237 131 aaKnown RBP9.82□□□□□ -0.84
PRDM9-201ENST00000296682 COQ4Q9Y3A0 265 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 SCINQ9Y6U3 715 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 POLR2AP24928 1970 aaKnown RBP9.82□□□□□ -0.84
PRDM9-201ENST00000296682 ACKR2O00590 384 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 HCRTO43612 131 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 GH1P01241 217 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 IQCF3P0C7M6 154 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 LCP1P13796 627 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 CHN1P15882 459 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 CREB1P16220 341 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 HSPA6P17066 643 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 TAF5Q15542 800 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 PAN2Q504Q3 1202 aaKnown RBP9.82□□□□□ -0.84
PRDM9-201ENST00000296682 DUPD1Q68J44 220 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 NLRP14Q86W24 1093 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 SCUBE3Q8IX30 993 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 CTAGE3PQ8IX95 158 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 ZBED8Q8IZ13 594 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 ATL2Q8NHH9 583 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 ARHGEF2Q92974 986 aaKnown RBP9.82□□□□□ -0.84
PRDM9-201ENST00000296682 PRMT1Q99873 361 aaKnown RBP9.82□□□□□ -0.84
PRDM9-201ENST00000296682 JPH2Q9BR39 696 aaPredicted RBP9.82□□□□□ -0.84
PRDM9-201ENST00000296682 C2orf40Q9H1Z8 148 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 PABPC3Q9H361 631 aaKnown RBP9.82□□□□□ -0.84
PRDM9-201ENST00000296682 ALG13Q9NP73 1137 aaKnown RBP9.82□□□□□ -0.84
PRDM9-201ENST00000296682 IP6K2Q9UHH9 426 aa9.82□□□□□ -0.84
PRDM9-201ENST00000296682 FEZ2Q9UHY8 353 aaPredicted RBP9.82□□□□□ -0.84
PRDM9-201ENST00000296682 SPDYE5A6NIY4 337 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 PDGFRAP16234 1089 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 ARF4P18085 180 aaPredicted RBP9.81□□□□□ -0.84
PRDM9-201ENST00000296682 RTP1P59025 263 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 ZNF200P98182 395 aaPredicted RBP9.81□□□□□ -0.84
PRDM9-201ENST00000296682 PPP2R5DQ14738 602 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 TMEM132DQ14C87 1099 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 HADHQ16836 314 aaKnown RBP9.81□□□□□ -0.84
PRDM9-201ENST00000296682 C15orf59Q2T9L4 293 aaPredicted RBP9.81□□□□□ -0.84
PRDM9-201ENST00000296682 PPP1R21Q6ZMI0 780 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 CCDC121Q6ZUS5 278 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 GLIS1Q8NBF1 620 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 RBM15Q96T37 977 aaKnown RBP eCLIP9.81□□□□□ -0.84
PRDM9-201ENST00000296682 CCDC77Q9BR77 488 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 PPP2R3BQ9Y5P8 575 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 MGAMO43451 1857 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 BTBD19C9JJ37 291 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 ASS1P00966 412 aaKnown RBP9.81□□□□□ -0.84
PRDM9-201ENST00000296682 UNGP13051 313 aaPredicted RBP9.81□□□□□ -0.84
PRDM9-201ENST00000296682 CDH6P55285 790 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 SH3PXD2AQ5TCZ1 1133 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 SRLQ86TD4 932 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 TWNKQ96RR1 684 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 TXLNGYQ9BZA5 131 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 GOLGA2P5Q9HBQ8 144 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 HESX1Q9UBX0 185 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 A0A0G2JLL6 359 aaPredicted RBP9.81□□□□□ -0.84
PRDM9-201ENST00000296682 VGLL3A8MV65 326 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 A8MXQ7 604 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 GRIN3BO60391 1043 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 TJP3O95049 919 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 NDST1P52848 882 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 RABGGTBP53611 331 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 HUNKP57058 714 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 BYSLQ13895 437 aaKnown RBP9.81□□□□□ -0.84
PRDM9-201ENST00000296682 TWF2Q6IBS0 349 aaKnown RBP9.81□□□□□ -0.84
PRDM9-201ENST00000296682 DARS2Q6PI48 645 aaKnown RBP9.81□□□□□ -0.84
PRDM9-201ENST00000296682 PRRT2Q7Z6L0 340 aaPredicted RBP9.81□□□□□ -0.84
PRDM9-201ENST00000296682 WDR49Q8IV35 697 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms