RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 VNN2O95498 520 aa28.78■■■□□ 2.2
SSU72-201ENST00000291386 BMP1P13497 986 aa28.78■■■□□ 2.2
SSU72-201ENST00000291386 ASPAP45381 313 aa28.78■■■□□ 2.2
SSU72-201ENST00000291386 KCNQ1P51787 676 aa28.78■■■□□ 2.2
SSU72-201ENST00000291386 TSPY1Q01534 308 aa28.78■■■□□ 2.2
SSU72-201ENST00000291386 ADCY1Q08828 1119 aa28.78■■■□□ 2.2
SSU72-201ENST00000291386 SMAD2Q15796 467 aaKnown RBP28.78■■■□□ 2.2
SSU72-201ENST00000291386 INTS6LQ5JSJ4 861 aaKnown RBP28.78■■■□□ 2.2
SSU72-201ENST00000291386 SPOPLQ6IQ16 392 aa28.78■■■□□ 2.2
SSU72-201ENST00000291386 LRRTM3Q86VH5 581 aa28.78■■■□□ 2.2
SSU72-201ENST00000291386 PKMYT1Q99640 499 aa28.78■■■□□ 2.2
SSU72-201ENST00000291386 FUCA2Q9BTY2 467 aa28.78■■■□□ 2.2
SSU72-201ENST00000291386 BCO2Q9BYV7 579 aa28.78■■■□□ 2.2
SSU72-201ENST00000291386 PRKD2Q9BZL6 878 aa28.78■■■□□ 2.2
SSU72-201ENST00000291386 SMYD3Q9H7B4 428 aa28.78■■■□□ 2.2
SSU72-201ENST00000291386 CDH9Q9ULB4 789 aa28.78■■■□□ 2.2
SSU72-201ENST00000291386 NFE2L3Q9Y4A8 694 aa28.78■■■□□ 2.2
SSU72-201ENST00000291386 USP15Q9Y4E8 981 aaPredicted RBP28.78■■■□□ 2.2
SSU72-201ENST00000291386 CCDC195A0A1B0GUA6 201 aa28.77■■■□□ 2.2
SSU72-201ENST00000291386 LRRN2O75325 713 aa28.77■■■□□ 2.2
SSU72-201ENST00000291386 RFPL2O75678 378 aa28.77■■■□□ 2.2
SSU72-201ENST00000291386 SEC24AO95486 1093 aa28.77■■■□□ 2.2
SSU72-201ENST00000291386 AFPP02771 609 aaKnown RBP28.77■■■□□ 2.2
SSU72-201ENST00000291386 GNL1P36915 607 aaPredicted RBP28.77■■■□□ 2.2
SSU72-201ENST00000291386 PPM1LQ5SGD2 360 aa28.77■■■□□ 2.2
SSU72-201ENST00000291386 SLC7A14Q8TBB6 771 aa28.77■■■□□ 2.2
SSU72-201ENST00000291386 ELMO3Q96BJ8 720 aa28.77■■■□□ 2.2
SSU72-201ENST00000291386 ZNF707Q96C28 371 aaPredicted RBP28.77■■■□□ 2.2
SSU72-201ENST00000291386 NIF3L1Q9GZT8 377 aa28.77■■■□□ 2.2
SSU72-201ENST00000291386 DNAJC25Q9H1X3 360 aa28.77■■■□□ 2.2
SSU72-201ENST00000291386 SNX25Q9H3E2 840 aa28.77■■■□□ 2.2
SSU72-201ENST00000291386 CYP3A43Q9HB55 503 aa28.77■■■□□ 2.2
SSU72-201ENST00000291386 CYP4F11Q9HBI6 524 aa28.77■■■□□ 2.2
SSU72-201ENST00000291386 XIRP2A4UGR9 3374 aa28.76■■■□□ 2.19
SSU72-201ENST00000291386 C2orf16Q68DN1 1984 aa28.76■■■□□ 2.19
SSU72-201ENST00000291386 LMO2P25791 158 aa28.76■■■□□ 2.19
SSU72-201ENST00000291386 CETN1Q12798 172 aa28.76■■■□□ 2.19
SSU72-201ENST00000291386 NFKBIBQ15653 356 aa28.76■■■□□ 2.19
SSU72-201ENST00000291386 SLC39A12Q504Y0 691 aa28.76■■■□□ 2.19
SSU72-201ENST00000291386 WDR44Q5JSH3 913 aa28.76■■■□□ 2.19
SSU72-201ENST00000291386 FAM171BQ6P995 826 aa28.76■■■□□ 2.19
SSU72-201ENST00000291386 TMC5Q6UXY8 1006 aa28.76■■■□□ 2.19
SSU72-201ENST00000291386 OR6B3Q8NGW1 331 aa28.76■■■□□ 2.19
SSU72-201ENST00000291386 NECTIN4Q96NY8 510 aa28.76■■■□□ 2.19
SSU72-201ENST00000291386 APOL5Q9BWW9 433 aa28.76■■■□□ 2.19
SSU72-201ENST00000291386 FAM124BQ9H5Z6 455 aaPredicted RBP28.76■■■□□ 2.19
SSU72-201ENST00000291386 SAMSN1Q9NSI8 373 aaKnown RBP28.76■■■□□ 2.19
SSU72-201ENST00000291386 NME7Q9Y5B8 376 aa28.76■■■□□ 2.19
SSU72-201ENST00000291386 CLSTN1O94985 981 aa28.75■■■□□ 2.19
SSU72-201ENST00000291386 ACAT1P24752 427 aaKnown RBP28.75■■■□□ 2.19
SSU72-201ENST00000291386 MTHFRP42898 656 aa28.75■■■□□ 2.19
SSU72-201ENST00000291386 NFE2Q16621 373 aaPredicted RBP28.75■■■□□ 2.19
SSU72-201ENST00000291386 TJAP1Q5JTD0 557 aa28.75■■■□□ 2.19
SSU72-201ENST00000291386 ATAT1Q5SQI0 421 aa28.75■■■□□ 2.19
SSU72-201ENST00000291386 SPPL2BQ8TCT7 592 aa28.75■■■□□ 2.19
SSU72-201ENST00000291386 RIPOR3Q96MK2 946 aa28.75■■■□□ 2.19
SSU72-201ENST00000291386 BPIFA3Q9BQP9 254 aa28.75■■■□□ 2.19
SSU72-201ENST00000291386 SYT15Q9BQS2 421 aa28.75■■■□□ 2.19
SSU72-201ENST00000291386 NAT10Q9H0A0 1025 aaKnown RBP28.75■■■□□ 2.19
SSU72-201ENST00000291386 SDCBP2Q9H190 292 aa28.75■■■□□ 2.19
SSU72-201ENST00000291386 MAGEC2Q9UBF1 373 aaPredicted RBP28.75■■■□□ 2.19
SSU72-201ENST00000291386 INSL5Q9Y5Q6 135 aa28.75■■■□□ 2.19
SSU72-201ENST00000291386 PRRG1O14668 218 aa28.74■■■□□ 2.19
SSU72-201ENST00000291386 HCRTO43612 131 aa28.74■■■□□ 2.19
SSU72-201ENST00000291386 IL9P15248 144 aa28.74■■■□□ 2.19
SSU72-201ENST00000291386 EEF1GP26641 437 aaKnown RBP28.74■■■□□ 2.19
SSU72-201ENST00000291386 MTIF2P46199 727 aaKnown RBP28.74■■■□□ 2.19
SSU72-201ENST00000291386 CDH8P55286 799 aa28.74■■■□□ 2.19
SSU72-201ENST00000291386 CBX2Q14781 532 aaPredicted RBP28.74■■■□□ 2.19
SSU72-201ENST00000291386 CDKAL1Q5VV42 579 aa28.74■■■□□ 2.19
SSU72-201ENST00000291386 SCARA5Q6ZMJ2 495 aa28.74■■■□□ 2.19
SSU72-201ENST00000291386 LMO3Q8TAP4 145 aa28.74■■■□□ 2.19
SSU72-201ENST00000291386 PGLYRP2Q96PD5 576 aa28.74■■■□□ 2.19
SSU72-201ENST00000291386 TMLHEQ9NVH6 421 aa28.74■■■□□ 2.19
SSU72-201ENST00000291386 SYCE3A1L190 88 aa28.73■■■□□ 2.19
SSU72-201ENST00000291386 A8MXQ7 604 aa28.73■■■□□ 2.19
SSU72-201ENST00000291386 PRKCSHP14314 528 aaPredicted RBP28.73■■■□□ 2.19
SSU72-201ENST00000291386 RAP1GAPP47736 663 aa28.73■■■□□ 2.19
SSU72-201ENST00000291386 MYL5Q02045 173 aa28.73■■■□□ 2.19
SSU72-201ENST00000291386 INCA1Q0VD86 236 aa28.73■■■□□ 2.19
SSU72-201ENST00000291386 DUSP4Q13115 394 aa28.73■■■□□ 2.19
SSU72-201ENST00000291386 MAPRE1Q15691 268 aaKnown RBP28.73■■■□□ 2.19
SSU72-201ENST00000291386 MAN2A1Q16706 1144 aa28.73■■■□□ 2.19
SSU72-201ENST00000291386 ANO6Q4KMQ2 910 aa28.73■■■□□ 2.19
SSU72-201ENST00000291386 UNC93AQ86WB7 457 aa28.73■■■□□ 2.19
SSU72-201ENST00000291386 CREBRFQ8IUR6 639 aa28.73■■■□□ 2.19
SSU72-201ENST00000291386 ATAD1Q8NBU5 361 aa28.73■■■□□ 2.19
SSU72-201ENST00000291386 FEZF2Q8TBJ5 459 aa28.73■■■□□ 2.19
SSU72-201ENST00000291386 CRISPLD1Q9H336 500 aa28.73■■■□□ 2.19
SSU72-201ENST00000291386 KCNJ18B7U540 433 aa28.72■■■□□ 2.19
SSU72-201ENST00000291386 XYLBO75191 536 aa28.72■■■□□ 2.19
SSU72-201ENST00000291386 PDGFRBP09619 1106 aa28.72■■■□□ 2.19
SSU72-201ENST00000291386 KCNJ12Q14500 433 aa28.72■■■□□ 2.19
SSU72-201ENST00000291386 EHBP1Q8NDI1 1231 aa28.72■■■□□ 2.19
SSU72-201ENST00000291386 SMG7Q92540 1137 aaKnown RBP28.72■■■□□ 2.19
SSU72-201ENST00000291386 ABCB6Q9NP58 842 aa28.72■■■□□ 2.19
SSU72-201ENST00000291386 CRTAC1Q9NQ79 661 aa28.72■■■□□ 2.19
SSU72-201ENST00000291386 GTF3C4Q9UKN8 822 aa28.72■■■□□ 2.19
SSU72-201ENST00000291386 PCDHB5Q9Y5E4 795 aa28.72■■■□□ 2.19
SSU72-201ENST00000291386 DENND4AQ7Z401 1863 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms