RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 ITIH5Q86UX2 942 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 DCP1BQ8IZD4 617 aaKnown RBP11.26□□□□□ -0.61
SNF8-201ENST00000290330 OR5B17Q8NGF7 314 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 SPPL2BQ8TCT7 592 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 SCFD1Q8WVM8 642 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 DNASE1L2Q92874 299 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 LPIN3Q9BQK8 851 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 MKNK1Q9BUB5 465 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 OSBPL6Q9BZF3 934 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 SLITRK6Q9H5Y7 841 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 BRD9Q9H8M2 597 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 KIAA1586Q9HCI6 787 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 LTB4R2Q9NPC1 389 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 HEBP1Q9NRV9 189 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 AGPAT3Q9NRZ7 376 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 TMLHEQ9NVH6 421 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 INTS13Q9NVM9 706 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 GDAP2Q9NXN4 497 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 NCANO14594 1321 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 PTPRJQ12913 1337 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 COL4A3Q01955 1670 aa11.26□□□□□ -0.61
SNF8-201ENST00000290330 TSC2P49815 1807 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.25□□□□□ -0.61
SNF8-201ENST00000290330 SHISA7A6NL88 538 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 FAM170BA6NMN3 283 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 FGF19O95750 216 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 SLFN14P0C7P3 912 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 GABRR2P28476 465 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 GDI1P31150 447 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 SNRPFP62306 86 aaKnown RBP11.25□□□□□ -0.61
SNF8-201ENST00000290330 TSPY1Q01534 308 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 BFSP1Q12934 665 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 CUL4BQ13620 913 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 UBXN2BQ14CS0 331 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 VEPH1Q14D04 833 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 SURF1Q15526 300 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 SNRNP35Q16560 246 aaKnown RBP11.25□□□□□ -0.61
SNF8-201ENST00000290330 DUOXA2Q1HG44 320 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 CLEC17AQ6ZS10 378 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 TPRG1Q6ZUI0 275 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 ASCL5Q7RTU5 278 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 FRMD5Q7Z6J6 570 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 ARID3BQ8IVW6 561 aaPredicted RBP11.25□□□□□ -0.61
SNF8-201ENST00000290330 C1orf210Q8IVY1 113 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 MFSD6LQ8IWD5 586 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 NELFCDQ8IXH7 590 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 GRAMD1CQ8IYS0 662 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 TMEM86AQ8N2M4 240 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 TOP6BLQ8N6T0 577 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 RDH13Q8NBN7 331 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 FAM200AQ8TCP9 573 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 DEPDC1BQ8WUY9 529 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 IRF7Q92985 503 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 E2F7Q96AV8 911 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 RSPRY1Q96DX4 576 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 ANKRD36BP1Q96IX9 119 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 NELL2Q99435 816 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 ACBD6Q9BR61 282 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 ATXN3LQ9H3M9 355 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 IL21Q9HBE4 155 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 SLC39A2Q9NP94 309 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 TRPV5Q9NQA5 729 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 DDX43Q9NXZ2 648 aaKnown RBP11.25□□□□□ -0.61
SNF8-201ENST00000290330 ABI2Q9NYB9 513 aaPredicted RBP11.25□□□□□ -0.61
SNF8-201ENST00000290330 SERTAD1Q9UHV2 236 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 ZDHHC9Q9Y397 364 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 PCDHB5Q9Y5E4 795 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 SNX9Q9Y5X1 595 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 UBE4BO95155 1302 aa11.25□□□□□ -0.61
SNF8-201ENST00000290330 HEPACAM2A8MVW5 462 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 GABRDO14764 452 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 ZNF263O14978 683 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 CLIC2O15247 247 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 ACTN4O43707 911 aaKnown RBP11.24□□□□□ -0.61
SNF8-201ENST00000290330 TNNC2P02585 160 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 ACAT1P24752 427 aaKnown RBP11.24□□□□□ -0.61
SNF8-201ENST00000290330 TARSP26639 723 aaKnown RBP11.24□□□□□ -0.61
SNF8-201ENST00000290330 MYL7Q01449 175 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 MYO1EQ12965 1108 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 NFE2Q16621 373 aaPredicted RBP11.24□□□□□ -0.61
SNF8-201ENST00000290330 BMT2Q1RMZ1 405 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 SOWAHAQ2M3V2 549 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 SKOR2Q2VWA4 1001 aaPredicted RBP11.24□□□□□ -0.61
SNF8-201ENST00000290330 INTS6LQ5JSJ4 861 aaKnown RBP11.24□□□□□ -0.61
SNF8-201ENST00000290330 GPR158Q5T848 1215 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 ZNF852Q6ZMS4 543 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 DPH6Q7L8W6 267 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 LIMS2Q7Z4I7 341 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 OSTM1Q86WC4 334 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 GPIHBP1Q8IV16 184 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 WDR49Q8IV35 697 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 CEP57L1Q8IYX8 460 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 XXYLT1Q8NBI6 393 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 SPATA18Q8TC71 538 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 GIPC2Q8TF65 315 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 LEO1Q8WVC0 666 aaPredicted RBP11.24□□□□□ -0.61
SNF8-201ENST00000290330 NKD2Q969F2 451 aaPredicted RBP11.24□□□□□ -0.61
SNF8-201ENST00000290330 CLDN23Q96B33 292 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 HPDLQ96IR7 371 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 CHAMP1Q96JM3 812 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms