RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 ZCWPW1Q9H0M4 648 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 C11orf16Q9NQ32 467 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 AVENQ9NQS1 362 aaPredicted RBP9.87□□□□□ -0.83
HMGN1-201ENST00000288344 HSFX1Q9UBD0 423 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 AFF4Q9UHB7 1163 aaKnown RBP9.87□□□□□ -0.83
HMGN1-201ENST00000288344 L1RE1Q9UN81 338 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 AGAP1Q9UPQ3 857 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 USTQ9Y2C2 406 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 NUB1Q9Y5A7 615 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 OR6C75A6NL08 312 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 H7C4K7 107 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 CYB561D2O14569 222 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 MOSPD3O75425 235 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 PNPLA4P41247 253 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 MTHFRP42898 656 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 EPHA5P54756 1037 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 RBP5P82980 135 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 YWHAHQ04917 246 aaPredicted RBP9.86□□□□□ -0.83
HMGN1-201ENST00000288344 PPP3CAQ08209 521 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 ZACNQ401N2 412 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 CTXN3Q4LDR2 81 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 ATAT1Q5SQI0 421 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 TDRD10Q5VZ19 366 aaKnown RBP9.86□□□□□ -0.83
HMGN1-201ENST00000288344 FAM171BQ6P995 826 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 EP400NLQ6ZTU2 488 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 SV2AQ7L0J3 742 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 GLYCTKQ8IVS8 523 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 ZDHHC14Q8IZN3 488 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 PDCL2Q8N4E4 241 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 SPATA18Q8TC71 538 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 EPHX3Q9H6B9 360 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 TMLHEQ9NVH6 421 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 DNMT3BQ9UBC3 853 aaKnown RBP9.86□□□□□ -0.83
HMGN1-201ENST00000288344 DPP7Q9UHL4 492 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 FAM50BQ9Y247 325 aa9.86□□□□□ -0.83
HMGN1-201ENST00000288344 GOLGA6L4A6NEF3 574 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 C2CD4DB7Z1M9 353 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 HCRTO43612 131 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 EXOC3O60645 756 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 LRRN2O75325 713 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 AP1G2O75843 785 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 C8AP07357 584 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 OR4Q2P0C623 313 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 SRGAP2BP0DMP2 458 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 ADAM9Q13443 819 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 OVOS1Q6IE37 1185 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 CES5AQ6NT32 575 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 TTI2Q6NXR4 508 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 DSTYKQ6XUX3 929 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 RNF135Q8IUD6 432 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 TOP6BLQ8N6T0 577 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 SMARCE1Q969G3 411 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 CCDC127Q96BQ5 260 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 ACBD6Q9BR61 282 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 MKNK1Q9BUB5 465 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 DNAJC25Q9H1X3 360 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 RMND1Q9NWS8 449 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 CEP72Q9P209 647 aa9.85□□□□□ -0.83
HMGN1-201ENST00000288344 MTMR11A4FU01 709 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 ANHXE9PGG2 379 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 CALUO43852 315 aaPredicted RBP9.84□□□□□ -0.83
HMGN1-201ENST00000288344 TACC1O75410 805 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 SMC2O95347 1197 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 NR2F2P24468 414 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 CCNE1P24864 410 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 LMO2P25791 158 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 AP3M2P53677 418 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 MYL6P60660 151 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 SV2CQ496J9 727 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 PRSS36Q5K4E3 855 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 ZNF280DQ6N043 979 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 RBM43Q6ZSC3 357 aaKnown RBP9.84□□□□□ -0.83
HMGN1-201ENST00000288344 TTC9BQ8N6N2 239 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 ATAD1Q8NBU5 361 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 SLC7A14Q8TBB6 771 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 GPT2Q8TD30 523 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 DHTKD1Q96HY7 919 aaPredicted RBP9.84□□□□□ -0.83
HMGN1-201ENST00000288344 HPDLQ96IR7 371 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 RIPOR3Q96MK2 946 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 MYADMQ96S97 322 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 GTPBP4Q9BZE4 634 aaKnown RBP9.84□□□□□ -0.83
HMGN1-201ENST00000288344 SDCBP2Q9H190 292 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 EPS15L1Q9UBC2 864 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 DSEQ9UL01 958 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 COQ4Q9Y3A0 265 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 PTPRDP23468 1912 aa9.84□□□□□ -0.83
HMGN1-201ENST00000288344 TRIM49BA6NDI0 452 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 PMM2O15305 246 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 MICAL2O94851 1124 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 KIF20AO95235 890 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 ASS1P00966 412 aaKnown RBP9.83□□□□□ -0.84
HMGN1-201ENST00000288344 DLATP10515 647 aaKnown RBP9.83□□□□□ -0.84
HMGN1-201ENST00000288344 ODC1P11926 461 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 TNNI1P19237 187 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 WARSP23381 471 aaKnown RBP9.83□□□□□ -0.84
HMGN1-201ENST00000288344 ATICP31939 592 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 CA8P35219 290 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 PSMC2P35998 433 aaKnown RBP9.83□□□□□ -0.84
HMGN1-201ENST00000288344 CCR2P41597 374 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 VAMP7P51809 220 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms