RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 IDI2Q9BXS1 227 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 VIL1P09327 827 aaKnown RBP13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 SNHG28P0DPA3 235 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 TRPC1P48995 793 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 ZBTB41Q5SVQ8 909 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 ANGEL2Q5VTE6 544 aaKnown RBP13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 GALNT4Q8N4A0 578 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 UBA3Q8TBC4 463 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 FRMPD4Q14CM0 1322 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 IGSF9BQ9UPX0 1349 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 P4HA2O15460 535 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 ADRB2P07550 413 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 CA8P35219 290 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 ALDH18A1P54886 795 aaKnown RBP13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 NFX1Q12986 1120 aaKnown RBP13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 RARS2Q5T160 578 aaKnown RBP13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 C3orf62Q6ZUJ4 267 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 ZNF280CQ8ND82 737 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 ATXN7L3BQ96GX2 97 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 RMDN2Q96LZ7 410 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 SPATA33Q96N06 139 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 RPS6KC1Q96S38 1066 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 TMEM121Q9BTD3 319 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 EIF2AQ9BY44 585 aaKnown RBP13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 MTMR12Q9C0I1 747 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 CYP26B1Q9NR63 512 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 E2F8A0AVK6 867 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 FAM47DPA6NHR8 397 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 XPO1O14980 1071 aaKnown RBP13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 LPXNO60711 386 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 APRTP07741 180 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 HSPA8P11142 646 aaKnown RBP13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 ITGB3BPQ13352 177 aaPredicted RBP13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 EMC1Q8N766 993 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 FEZF2Q8TBJ5 459 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 EPS8L1Q8TE68 723 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 MKL1Q969V6 931 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 TBC1D23Q9NUY8 699 aa13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 STX18Q9P2W9 335 aaKnown RBP13.15□□□□□ -0.3
SLC6A1-201ENST00000287766 SCN11AQ9UI33 1791 aa13.15□□□□□ -0.31
SLC6A1-201ENST00000287766 GOLGA8QA0A0J9YX86 632 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 GOLGA8OA6NCC3 632 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 GOLGA8NF8WBI6 632 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 ATP9AO75110 1047 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 UBOX5O94941 541 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 NQO1P15559 274 aaKnown RBP13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 BCAR1P56945 870 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 TRIM72Q6ZMU5 477 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 ZNF513Q8N8E2 541 aaPredicted RBP13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 PARD3BQ8TEW8 1205 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 DEPDC1BQ8WUY9 529 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 FAM129AQ9BZQ8 928 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 VPS11Q9H270 941 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 DNAJC18Q9H819 358 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 SCHIP1Q9P0W5 487 aaPredicted RBP13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 MYH8P13535 1937 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 FOXO6A8MYZ6 492 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 PDE5AO76074 875 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 GZMAP12544 262 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 CUL2Q13617 745 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 PRPSAP1Q14558 356 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 RCN1Q15293 331 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 NBPF12Q5TAG4 269 aaPredicted RBP13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 C15orf52Q6ZUT6 534 aaKnown RBP13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 ATP11CQ8NB49 1132 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 MIEF2Q96C03 454 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 ANKEF1Q9NU02 776 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 GON4LQ3T8J9 2241 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 ABCC6O95255 1503 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 CYP3A7-CYP3A51PA0A087WV96 503 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 RIPK2O43353 540 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 EXTL3O43909 919 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 VCAM1P19320 739 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 CYP3A7P24462 503 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 CYP24A1Q07973 514 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 PRELID2Q8N945 189 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 FAM71DQ8N9W8 422 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 SCFD2Q8WU76 684 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 NMD3Q96D46 503 aaKnown RBP13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 DHX35Q9H5Z1 703 aaKnown RBP13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 RAB6BQ9NRW1 208 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 STRIP2Q9ULQ0 834 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 DAB1O75553 588 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 ZSCAN5DPP0CG00 497 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 FNTAP49354 379 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 CRY2Q49AN0 593 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 CERKQ8TCT0 537 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 TTC25Q96NG3 672 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 VAV3Q9UKW4 847 aa13.14□□□□□ -0.31
SLC6A1-201ENST00000287766 LOC100653049A0A140TA62 436 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 KRT34O76011 436 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 KRT38O76015 456 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 KRT75O95678 551 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 KRT7P08729 469 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 RBP3P10745 1247 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 ADORA2BP29275 332 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 VHLP40337 213 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 ARL4AP40617 200 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 ITKQ08881 620 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 TMEM62Q0P6H9 643 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms