RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 MMP10P09238 476 aa16.45■□□□□ 0.22
USP43-201ENST00000285199 PRKCIP41743 596 aa16.45■□□□□ 0.22
USP43-201ENST00000285199 RPS6P62753 249 aaKnown RBP16.45■□□□□ 0.22
USP43-201ENST00000285199 SPP2Q13103 211 aa16.45■□□□□ 0.22
USP43-201ENST00000285199 FAM13CQ8NE31 585 aa16.45■□□□□ 0.22
USP43-201ENST00000285199 FHDC1Q9C0D6 1143 aaPredicted RBP16.45■□□□□ 0.22
USP43-201ENST00000285199 TRPC5Q9UL62 973 aaPredicted RBP16.45■□□□□ 0.22
USP43-201ENST00000285199 R3HDM2Q9Y2K5 976 aaKnown RBP16.45■□□□□ 0.22
USP43-201ENST00000285199 PCDHA3Q9Y5H8 950 aa16.45■□□□□ 0.22
USP43-201ENST00000285199 MCPH1Q8NEM0 835 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 EPS8L1Q8TE68 723 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 CCDC138Q96M89 665 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 MTFR1LQ9H019 292 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 CLIC5Q9NZA1 410 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 POLLQ9UGP5 575 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 NWD1Q149M9 1564 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 NEURL4Q96JN8 1562 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 SNRPAP09012 282 aaKnown RBP16.44■□□□□ 0.22
USP43-201ENST00000285199 OSBPP22059 807 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 RPL10AP62906 217 aaKnown RBP16.44■□□□□ 0.22
USP43-201ENST00000285199 CRELD2Q6UXH1 353 aaPredicted RBP16.44■□□□□ 0.22
USP43-201ENST00000285199 GGA2Q9UJY4 613 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 ZMPSTE24O75844 475 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 NUDT17P0C025 328 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 GYS1P13807 737 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 SLC34A1Q06495 639 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 ZNF568Q3ZCX4 644 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 HEATR6Q6AI08 1181 aaKnown RBP16.44■□□□□ 0.22
USP43-201ENST00000285199 MIS18BP1Q6P0N0 1132 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 C16orf87Q6PH81 154 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 MPHOSPH6Q99547 160 aaKnown RBP16.44■□□□□ 0.22
USP43-201ENST00000285199 TBC1D22BQ9NU19 505 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 LRCH1Q9Y2L9 728 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 PCDHA10Q9Y5I2 948 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 IVNS1ABPQ9Y6Y0 642 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 MST1RQ04912 1400 aa16.44■□□□□ 0.22
USP43-201ENST00000285199 E9PBE3 544 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 MED7O43513 233 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 C21orf2O43822 256 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 KLHL41O60662 606 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 GZMAP12544 262 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 SERPINB5P36952 375 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 ARHGAP18Q8N392 663 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 LRRC57Q8N9N7 239 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 DNAJC5Q9H3Z4 198 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 THEGQ9P2T0 379 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 SSX2IPQ9Y2D8 614 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 MYH8P13535 1937 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 PEX1O43933 1283 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 PID1Q7Z2X4 250 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 CENPTQ96BT3 561 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 BTBD10Q9BSF8 475 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 POLR3CQ9BUI4 534 aaPredicted RBP16.43■□□□□ 0.22
USP43-201ENST00000285199 KCNQ5Q9NR82 932 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 RNF146Q9NTX7 359 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 C20orf96Q9NUD7 363 aaPredicted RBP16.43■□□□□ 0.22
USP43-201ENST00000285199 V9GYQ6 96 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 F8VP50 259 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 TGFB1I1O43294 461 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 MGRN1O60291 552 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 SDC4P31431 198 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 KIF19Q2TAC6 998 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 RPF1Q9H9Y2 349 aaKnown RBP16.43■□□□□ 0.22
USP43-201ENST00000285199 IL1RL2Q9HB29 575 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 ASNSD1Q9NWL6 643 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 SPATA31D1Q6ZQQ2 1576 aa16.43■□□□□ 0.22
USP43-201ENST00000285199 KAT6AQ92794 2004 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 PIK3CDO00329 1044 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 USP1O94782 785 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 MT-CO1P00395 513 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 ELK3P41970 407 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 BAATQ14032 418 aaPredicted RBP16.42■□□□□ 0.22
USP43-201ENST00000285199 FSCBQ5H9T9 825 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 RARS2Q5T160 578 aaKnown RBP16.42■□□□□ 0.22
USP43-201ENST00000285199 KIAA1586Q9HCI6 787 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 TBX20Q9UMR3 447 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 CENPCQ03188 943 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 GABPAQ06546 454 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 FAAP100Q0VG06 881 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 DNAL1Q4LDG9 190 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 SNRNP48Q6IEG0 339 aaKnown RBP16.42■□□□□ 0.22
USP43-201ENST00000285199 PPIL6Q8IXY8 311 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 PGBD4Q96DM1 585 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 CLPTM1LQ96KA5 538 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 CEP41Q9BYV8 373 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.42■□□□□ 0.22
USP43-201ENST00000285199 RIMBP3CA6NJZ7 1639 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 RIMBP3BA6NNM3 1639 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 RIMBP3Q9UFD9 1639 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 TTC36A6NLP5 189 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 CES2O00748 559 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 PROSCO94903 275 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 NUDT2P50583 147 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 CYP4X1Q8N118 509 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 ZNF384Q8TF68 577 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 EFHD1Q9BUP0 239 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 KCNG1Q9UIX4 513 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 DNAJC16Q9Y2G8 782 aa16.42■□□□□ 0.22
USP43-201ENST00000285199 MCF2P10911 925 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 KCNA4P22459 653 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms