RNA–Protein interactions for RNA: ENST00000284041.7

SREK1-201, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 3,751 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-201ENST00000284041 SIRT5Q9NXA8 310 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 DDX25Q9UHL0 483 aaKnown RBP4.29□□□□□ -1.72
SREK1-201ENST00000284041 ADAMTS8Q9UP79 889 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.29□□□□□ -1.72
SREK1-201ENST00000284041 PNPLA7Q6ZV29 1317 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 CPLX1O14810 134 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 CSF1P09603 554 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 ARP10275 920 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 TRHRP34981 398 aaPredicted RBP4.29□□□□□ -1.72
SREK1-201ENST00000284041 GTF2A1P52655 376 aaPredicted RBP4.29□□□□□ -1.72
SREK1-201ENST00000284041 HDAC4P56524 1084 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 UBASH3AP57075 661 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 C17orf67Q0P5P2 114 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 RASA2Q15283 850 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 FBXO47Q5MNV8 452 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 ARMC4Q5T2S8 1044 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 EMC10Q5UCC4 262 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 OGFOD3Q6PK18 319 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 RRAGAQ7L523 313 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 CHD1LQ86WJ1 897 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 SLC7A5P1Q8MH63 180 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 USP13Q92995 863 aaPredicted RBP4.29□□□□□ -1.72
SREK1-201ENST00000284041 CLPTM1LQ96KA5 538 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 SNX22Q96L94 193 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 ASB2Q96Q27 587 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 CHST8Q9H2A9 424 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 TRMT1Q9NXH9 659 aaKnown RBP4.29□□□□□ -1.72
SREK1-201ENST00000284041 ARHGAP20Q9P2F6 1191 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 ZMYM3Q14202 1370 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 PI4K2BG5E9Z4 385 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 PODXLO00592 558 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 REC8O95072 547 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 ITGB2P05107 769 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 ZGLP1P0C6A0 271 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 ELNP15502 786 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 MC3RP41968 323 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 PHEXP78562 749 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 SP140Q13342 867 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 ANKRD34AQ69YU3 496 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 ZNF804AQ7Z570 1209 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 ZNF280BQ86YH2 543 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 DTWD1Q8N5C7 304 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 FAM71BQ8TC56 605 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 HIC2Q96JB3 615 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 CNPPD1Q9BV87 410 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 PPP1R14DQ9NXH3 145 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 TRPS1Q9UHF7 1281 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 CTNNA3Q9UI47 895 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 ITM2BQ9Y287 266 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 HS3ST4Q9Y661 456 aa4.29□□□□□ -1.72
SREK1-201ENST00000284041 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.29□□□□□ -1.72
SREK1-201ENST00000284041 WRNQ14191 1432 aaPredicted RBP eCLIP4.29□□□□□ -1.72
SREK1-201ENST00000284041 FAM95CA0A1B0GW59 222 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 FOXN3O00409 490 aaPredicted RBP4.28□□□□□ -1.72
SREK1-201ENST00000284041 HNRNPA1P09651 372 aaKnown RBP eCLIP4.28□□□□□ -1.72
SREK1-201ENST00000284041 CD6P30203 668 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 HADHAP40939 763 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 BECN1Q14457 450 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 DLGAP5Q15398 846 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 PAN2Q504Q3 1202 aaKnown RBP4.28□□□□□ -1.72
SREK1-201ENST00000284041 SNX30Q5VWJ9 437 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 SPATA1Q5VX52 437 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 RPUSD3Q6P087 351 aaKnown RBP4.28□□□□□ -1.72
SREK1-201ENST00000284041 ZAR1Q86SH2 424 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 ADGRA1Q86SQ6 560 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 FBXL6Q8N531 539 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 PCSK9Q8NBP7 692 aaKnown RBP4.28□□□□□ -1.72
SREK1-201ENST00000284041 ZNF483Q8TF39 744 aaPredicted RBP4.28□□□□□ -1.72
SREK1-201ENST00000284041 WFDC12Q8WWY7 111 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 N4BP2L2Q92802 583 aaPredicted RBP4.28□□□□□ -1.72
SREK1-201ENST00000284041 ASIC4Q96FT7 647 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 OSBPL6Q9BZF3 934 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 MRPL18Q9H0U6 180 aaKnown RBP4.28□□□□□ -1.72
SREK1-201ENST00000284041 AKTIPQ9H8T0 292 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 DUSP13Q9UII6 198 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 PCDHGB4Q9UN71 923 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 WDR37Q9Y2I8 494 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 PITPNM2Q9BZ72 1349 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 LMTK3Q96Q04 1460 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 TRIM43BA6NCK2 446 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 AGAP14A8MT82 685 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 ABLIM1O14639 778 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 PHGDHO43175 533 aaKnown RBP4.28□□□□□ -1.72
SREK1-201ENST00000284041 PLOD3O60568 738 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 ALDH1A3P47895 512 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 NAP1L1P55209 391 aaKnown RBP4.28□□□□□ -1.72
SREK1-201ENST00000284041 MTM1Q13496 603 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 STIM1Q13586 685 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 WTAPQ15007 396 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 BEND4Q6ZU67 534 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 LIMS2Q7Z4I7 341 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 RIOX2Q8IUF8 465 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 NKAIN4Q8IVV8 208 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 SH3KBP1Q96B97 665 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 TRIM43Q96BQ3 446 aaPredicted RBP4.28□□□□□ -1.72
SREK1-201ENST00000284041 TWNKQ96RR1 684 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 SMARCAD1Q9H4L7 1026 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 LMBRD1Q9NUN5 540 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 TTI1O43156 1089 aa4.28□□□□□ -1.72
SREK1-201ENST00000284041 TCF7P36402 384 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms