RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 TADA2AO75478 443 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 PAEPP09466 180 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 SGO2Q562F6 1265 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 SPOUT1Q5T280 376 aaKnown RBP12.1□□□□□ -0.47
XRCC4-201ENST00000282268 C10orf76Q5T2E6 689 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 ACAD10Q6JQN1 1059 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 DCLRE1AQ6PJP8 1040 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 CD300LGQ6UXG3 332 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 NYAP1Q6ZVC0 841 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 ZNF677Q86XU0 584 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 TXLNBQ8N3L3 684 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 TOP6BLQ8N6T0 577 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 C1orf131Q8NDD1 294 aaKnown RBP12.1□□□□□ -0.47
XRCC4-201ENST00000282268 TET1Q8NFU7 2136 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 UBA3Q8TBC4 463 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 ARHGEF26Q96DR7 871 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 IL23AQ9NPF7 189 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 KIAA0100Q14667 2235 aaKnown RBP12.1□□□□□ -0.47
XRCC4-201ENST00000282268 ABHD14A-ACY1A0A1B0GW23 586 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 M0QYV0 167 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 TACC1O75410 805 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 MICAL2O94851 1124 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 VDRP11473 427 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 ODC1P11926 461 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 CCDC130P13994 396 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 WARSP23381 471 aaKnown RBP12.1□□□□□ -0.47
XRCC4-201ENST00000282268 ADORA2BP29275 332 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 NSFP46459 744 aaKnown RBP12.1□□□□□ -0.47
XRCC4-201ENST00000282268 DSC1Q08554 894 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 CCDC142Q17RM4 750 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 GOLGA7BQ2TAP0 167 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 METTL23Q86XA0 190 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 SLC35F6Q8N357 371 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 TTC39CQ8N584 583 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 CTNNBL1Q8WYA6 563 aaPredicted RBP12.1□□□□□ -0.47
XRCC4-201ENST00000282268 RSPH1Q8WYR4 309 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 DPF3Q92784 378 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 SECISBP2LQ93073 1101 aaKnown RBP12.1□□□□□ -0.47
XRCC4-201ENST00000282268 ZNF653Q96CK0 615 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 WDR24Q96S15 920 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 DDX43Q9NXZ2 648 aaKnown RBP12.1□□□□□ -0.47
XRCC4-201ENST00000282268 SALL4Q9UJQ4 1053 aa12.1□□□□□ -0.47
XRCC4-201ENST00000282268 CCDC85CA6NKD9 419 aa12.09□□□□□ -0.47
XRCC4-201ENST00000282268 PIK3R2O00459 728 aa12.09□□□□□ -0.47
XRCC4-201ENST00000282268 NRP1O14786 923 aa12.09□□□□□ -0.47
XRCC4-201ENST00000282268 PJA2O43164 708 aa12.09□□□□□ -0.47
XRCC4-201ENST00000282268 SLC11A1P49279 550 aa12.09□□□□□ -0.47
XRCC4-201ENST00000282268 WDR5P61964 334 aaKnown RBP12.09□□□□□ -0.47
XRCC4-201ENST00000282268 FPGSQ05932 587 aa12.09□□□□□ -0.47
XRCC4-201ENST00000282268 PPIGQ13427 754 aaKnown RBP eCLIP12.09□□□□□ -0.47
XRCC4-201ENST00000282268 PTPROQ16827 1216 aa12.09□□□□□ -0.47
XRCC4-201ENST00000282268 PPP1R26Q5T8A7 1209 aaPredicted RBP12.09□□□□□ -0.47
XRCC4-201ENST00000282268 LLGL2Q6P1M3 1020 aa12.09□□□□□ -0.47
XRCC4-201ENST00000282268 ZNF365Q70YC5 407 aa12.09□□□□□ -0.47
XRCC4-201ENST00000282268 CEP57Q86XR8 500 aa12.09□□□□□ -0.47
XRCC4-201ENST00000282268 C11orf70Q9BRQ4 267 aa12.09□□□□□ -0.47
XRCC4-201ENST00000282268 MED10Q9BTT4 135 aa12.09□□□□□ -0.47
XRCC4-201ENST00000282268 RNF216Q9NWF9 866 aaPredicted RBP12.09□□□□□ -0.47
XRCC4-201ENST00000282268 STXBP5LQ9Y2K9 1186 aa12.09□□□□□ -0.47
XRCC4-201ENST00000282268 FAN1Q9Y2M0 1017 aa12.09□□□□□ -0.47
XRCC4-201ENST00000282268 CEP83Q9Y592 693 aa12.09□□□□□ -0.47
XRCC4-201ENST00000282268 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.09□□□□□ -0.47
XRCC4-201ENST00000282268 ANKRD62A6NC57 917 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 FGBP02675 491 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 CYP1A1P04798 512 aaPredicted RBP12.08□□□□□ -0.48
XRCC4-201ENST00000282268 ALDH2P05091 517 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 TMEM253P0C7T8 217 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 UNGP13051 313 aaPredicted RBP12.08□□□□□ -0.48
XRCC4-201ENST00000282268 CASQ1P31415 396 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 EPHB4P54760 987 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 NOMO3P69849 1222 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 GPC5P78333 572 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 MDH1BQ5I0G3 518 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 COL13A1Q5TAT6 717 aaPredicted RBP12.08□□□□□ -0.48
XRCC4-201ENST00000282268 TRIM72Q6ZMU5 477 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 MMS22LQ6ZRQ5 1243 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 C16orf59Q7L2K0 433 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 UNC93AQ86WB7 457 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 CRIPAKQ8N1N5 446 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 TMEM35BQ8NCS4 154 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 TOP1MTQ969P6 601 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 B3GALT6Q96L58 329 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 COLEC11Q9BWP8 271 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 MRPL9Q9BYD2 267 aaKnown RBP12.08□□□□□ -0.48
XRCC4-201ENST00000282268 ISCUQ9H1K1 167 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 TSPAN16Q9UKR8 245 aa12.08□□□□□ -0.48
XRCC4-201ENST00000282268 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.08□□□□□ -0.48
XRCC4-201ENST00000282268 TDRD15B5MCY1 1934 aaKnown RBP12.07□□□□□ -0.48
XRCC4-201ENST00000282268 TMEM110-MUSTN1A8MSY1 372 aa12.07□□□□□ -0.48
XRCC4-201ENST00000282268 O00370 1275 aa12.07□□□□□ -0.48
XRCC4-201ENST00000282268 CLDN5O00501 218 aa12.07□□□□□ -0.48
XRCC4-201ENST00000282268 DGKIO75912 1065 aa12.07□□□□□ -0.48
XRCC4-201ENST00000282268 GZMAP12544 262 aa12.07□□□□□ -0.48
XRCC4-201ENST00000282268 PTPN1P18031 435 aaKnown RBP12.07□□□□□ -0.48
XRCC4-201ENST00000282268 TKTP29401 623 aaKnown RBP12.07□□□□□ -0.48
XRCC4-201ENST00000282268 ETF1P62495 437 aaKnown RBP12.07□□□□□ -0.48
XRCC4-201ENST00000282268 CNGA2Q16280 664 aa12.07□□□□□ -0.48
XRCC4-201ENST00000282268 CYP4A22Q5TCH4 519 aa12.07□□□□□ -0.48
XRCC4-201ENST00000282268 KIAA0319Q5VV43 1072 aa12.07□□□□□ -0.48
XRCC4-201ENST00000282268 LIMS2Q7Z4I7 341 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms