RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 RPL7AP62424 266 aaKnown RBP12.87□□□□□ -0.35
SDE2-201ENST00000272091 CYP4A22Q5TCH4 519 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 TMEM35BQ8NCS4 154 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 TRPV6Q9H1D0 765 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 CARD9Q9H257 536 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 TARSL2A2RTX5 802 aaKnown RBP12.86□□□□□ -0.35
SDE2-201ENST00000272091 MOXD2PA6NHM9 499 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 OGDHQ02218 1023 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 MBTPS1Q14703 1052 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 ZDHHC14Q8IZN3 488 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 C12orf29Q8N999 325 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 TSPAN18Q96SJ8 248 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 CPXM1Q96SM3 734 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 HINFPQ9BQA5 517 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 TSEN34Q9BSV6 310 aaKnown RBP12.86□□□□□ -0.35
SDE2-201ENST00000272091 FAM124BQ9H5Z6 455 aaPredicted RBP12.86□□□□□ -0.35
SDE2-201ENST00000272091 PCDHA3Q9Y5H8 950 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 PGRMC1O00264 195 aaKnown RBP12.86□□□□□ -0.35
SDE2-201ENST00000272091 ZMYND10O75800 440 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 MLH1P40692 756 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 MRPL10Q7Z7H8 261 aaKnown RBP12.86□□□□□ -0.35
SDE2-201ENST00000272091 RNPC3Q96LT9 517 aaKnown RBP12.86□□□□□ -0.35
SDE2-201ENST00000272091 AP1M1Q9BXS5 423 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 DPEP3Q9H4B8 488 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 TDRD15B5MCY1 1934 aaKnown RBP12.86□□□□□ -0.35
SDE2-201ENST00000272091 MIF4GDA9UHW6 222 aaKnown RBP12.86□□□□□ -0.35
SDE2-201ENST00000272091 TLR3O15455 904 aaKnown RBP12.86□□□□□ -0.35
SDE2-201ENST00000272091 ERBB2P04626 1255 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 MYBL2P10244 700 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 VDRP11473 427 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 LRPAP1P30533 357 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 GPD2P43304 727 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 KCTD19Q17RG1 926 aaPredicted RBP12.86□□□□□ -0.35
SDE2-201ENST00000272091 LIN9Q5TKA1 542 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 SH3TC2Q8TF17 1288 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 HEXIM2Q96MH2 286 aaKnown RBP12.86□□□□□ -0.35
SDE2-201ENST00000272091 WNT8AQ9H1J5 351 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 HMX1Q9NP08 348 aaPredicted RBP12.86□□□□□ -0.35
SDE2-201ENST00000272091 GDAP2Q9NXN4 497 aa12.86□□□□□ -0.35
SDE2-201ENST00000272091 CD4P01730 458 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 SLC7A5Q01650 507 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 CNGA2Q16280 664 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 SELENOOQ9BVL4 669 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 TMEM191CA6NGB0 347 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 GPR182O15218 404 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 MED7O43513 233 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 PROSCO94903 275 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 RPLP2P05387 115 aaKnown RBP12.85□□□□□ -0.35
SDE2-201ENST00000272091 PYGMP11217 842 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 PKDCCQ504Y2 493 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 FEZF2Q8TBJ5 459 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 L1RE1Q9UN81 338 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 CCDC151A5D8V7 595 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 CALB1P05937 261 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 CKBP12277 381 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 TAS2R40P59535 323 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 BRD3Q15059 726 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 PPP1R2P3Q6NXS1 205 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 GAD1Q99259 594 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 TRAIPQ9BWF2 469 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 NT5C1AQ9BXI3 368 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 PARVAQ9NVD7 372 aa12.85□□□□□ -0.35
SDE2-201ENST00000272091 KPNA7A9QM74 516 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 FGGP02679 453 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 TCF4P15884 667 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 GSCP56915 257 aaPredicted RBP12.84□□□□□ -0.35
SDE2-201ENST00000272091 PPP1R26Q5T8A7 1209 aaPredicted RBP12.84□□□□□ -0.35
SDE2-201ENST00000272091 LCLAT1Q6UWP7 414 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 ACOT1Q86TX2 421 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 XYLT1Q86Y38 959 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 UBA3Q8TBC4 463 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 KRT12Q99456 494 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 SCINQ9Y6U3 715 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 ARL5CA6NH57 179 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 M0QYV0 167 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 LMO2P25791 158 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 GABRB2P47870 512 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 LILRA4P59901 499 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 PAK2Q13177 524 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 SGO2Q562F6 1265 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 BEND6Q5SZJ8 279 aaPredicted RBP12.84□□□□□ -0.35
SDE2-201ENST00000272091 OSTM1Q86WC4 334 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 ERICH1Q86X53 443 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 TSPAN16Q9UKR8 245 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 PHF24Q9UPV7 400 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 TCRBV7S2A1N4TA0A589 114 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 ZSCAN5CA6NGD5 496 aaPredicted RBP12.84□□□□□ -0.35
SDE2-201ENST00000272091 BHMG1C9JSJ3 638 aaPredicted RBP12.84□□□□□ -0.35
SDE2-201ENST00000272091 TULP2O00295 520 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 SPOPO43791 374 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 GABBR2O75899 941 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 SASH3O75995 380 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 TTC30AQ86WT1 665 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 GSPT2Q8IYD1 628 aaKnown RBP12.84□□□□□ -0.35
SDE2-201ENST00000272091 C3orf58Q8NDZ4 430 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 HNRNPLLQ8WVV9 542 aaKnown RBP12.84□□□□□ -0.35
SDE2-201ENST00000272091 DDX27Q96GQ7 796 aaKnown RBP12.84□□□□□ -0.35
SDE2-201ENST00000272091 GLT1D1Q96MS3 346 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 MCEEQ96PE7 176 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 HERPUD2Q9BSE4 406 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms