RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 HACL1Q9UJ83 578 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 ARAP3Q8WWN8 1544 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 CDC42BPGQ6DT37 1551 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 ANO9A1A5B4 782 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 GH1P01241 217 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 ERVK-10P10266 1014 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 GUCY1A2P33402 732 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 SLC16A2P36021 539 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 NME3Q13232 169 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 SNX32Q86XE0 403 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 ANKRD13CQ8N6S4 541 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 C18orf8Q96DM3 657 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 PLEKHA4Q9H4M7 779 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 THG1LQ9NWX6 298 aaKnown RBP13.8□□□□□ -0.2
PRDM16-201ENST00000270722 AGO2Q9UKV8 859 aaKnown RBP13.8□□□□□ -0.2
PRDM16-201ENST00000270722 PCDHA6Q9UN73 950 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 PCDHA8Q9Y5H6 950 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 NPR2P20594 1047 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.8□□□□□ -0.2
PRDM16-201ENST00000270722 LRRC74AQ0VAA2 488 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 ZBED8Q8IZ13 594 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 COLEC11Q9BWP8 271 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 ENOPH1Q9UHY7 261 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 ATF5Q9Y2D1 282 aaPredicted RBP13.8□□□□□ -0.2
PRDM16-201ENST00000270722 GCC2Q8IWJ2 1684 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 ELAVL2Q12926 359 aaKnown RBP13.8□□□□□ -0.2
PRDM16-201ENST00000270722 SHCBP1Q8NEM2 672 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 STK33Q9BYT3 514 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 DLGAP2Q9P1A6 1054 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 STAP2Q9UGK3 403 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 NARFQ9UHQ1 456 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 IFNA14P01570 189 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 VHLP40337 213 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 KIAA0408Q6ZU52 694 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 MYLK2Q9H1R3 596 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 STON1Q9Y6Q2 735 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 FAM187AA6NFU0 413 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 C6orf222P0C671 652 aaPredicted RBP13.79□□□□□ -0.2
PRDM16-201ENST00000270722 UQCRBP14927 111 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 GTF2E2P29084 291 aaKnown RBP13.79□□□□□ -0.2
PRDM16-201ENST00000270722 YWHABP31946 246 aaKnown RBP13.79□□□□□ -0.2
PRDM16-201ENST00000270722 DHX34Q14147 1143 aaKnown RBP13.79□□□□□ -0.2
PRDM16-201ENST00000270722 PDIA6Q15084 440 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 CMTR1Q8N1G2 835 aaKnown RBP13.79□□□□□ -0.2
PRDM16-201ENST00000270722 OTUD5Q96G74 571 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 SPATA2Q9UM82 520 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 SAC3D1A6NKF1 404 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 CDH6P55285 790 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 SF3A3Q12874 501 aaKnown RBP eCLIP13.79□□□□□ -0.2
PRDM16-201ENST00000270722 XKR3Q5GH77 459 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 C19orf18Q8NEA5 215 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 SMG5Q9UPR3 1016 aaKnown RBP13.79□□□□□ -0.2
PRDM16-201ENST00000270722 PPP3CCP48454 512 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 PURAQ00577 322 aaKnown RBP13.79□□□□□ -0.2
PRDM16-201ENST00000270722 STARD3Q14849 445 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 PJA2O43164 708 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 GNRH1P01148 92 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 PSMC3P17980 439 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 SLC11A2P49281 568 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 EPC2Q52LR7 807 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 PTPRN2Q92932 1015 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 SENP2Q9HC62 589 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 NPHP4O75161 1426 aaPredicted RBP13.79□□□□□ -0.2
PRDM16-201ENST00000270722 CLK1P49759 484 aaKnown RBP13.79□□□□□ -0.2
PRDM16-201ENST00000270722 ROR2Q01974 943 aaKnown RBP13.79□□□□□ -0.2
PRDM16-201ENST00000270722 PIGHQ14442 188 aaPredicted RBP13.79□□□□□ -0.2
PRDM16-201ENST00000270722 KNOP1Q1ED39 458 aaKnown RBP13.79□□□□□ -0.2
PRDM16-201ENST00000270722 RABGAP1LQ5R372 815 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 FAM83BQ5T0W9 1011 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 SLC35F6Q8N357 371 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 TRAPPC9Q96Q05 1148 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 VTI1BQ9UEU0 232 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 ECE2O60344 883 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 C3orf20Q8ND61 904 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 GPR63Q9BZJ6 419 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 VPS33BQ9H267 617 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 HEG1Q9ULI3 1381 aa13.79□□□□□ -0.2
PRDM16-201ENST00000270722 STAT5BP51692 787 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 ANKRD40Q6AI12 368 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 ENKURQ8TC29 256 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 CCDC126Q96EE4 140 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 EPN3Q9H201 632 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 ARHGEF38Q9NXL2 777 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 SH2B2O14492 632 aaPredicted RBP13.78□□□□□ -0.2
PRDM16-201ENST00000270722 C21orf2O43822 256 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 TNFRSF21O75509 655 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 RPS12P25398 132 aaKnown RBP13.78□□□□□ -0.2
PRDM16-201ENST00000270722 HOXA13P31271 388 aaPredicted RBP13.78□□□□□ -0.2
PRDM16-201ENST00000270722 TGFBR2P37173 567 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 FCGRTP55899 365 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 CDH18Q13634 790 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 ZNF564Q8TBZ8 553 aaPredicted RBP13.78□□□□□ -0.2
PRDM16-201ENST00000270722 GALNT8Q9NY28 637 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 MYH8P13535 1937 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 TXNP10599 105 aaKnown RBP13.78□□□□□ -0.2
PRDM16-201ENST00000270722 NLRP11P59045 1033 aaKnown RBP13.78□□□□□ -0.2
PRDM16-201ENST00000270722 NOTUMQ6P988 496 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 NUDT12Q9BQG2 462 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 FAM173BQ6P4H8 233 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 DPP10Q8N608 796 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms