RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 RRN3P2A6NIE6 340 aa24.52■■□□□ 1.52
RAB40B-201ENST00000269347 ERBB2P04626 1255 aa24.52■■□□□ 1.52
RAB40B-201ENST00000269347 AKAP5P24588 427 aa24.52■■□□□ 1.52
RAB40B-201ENST00000269347 PTPN11Q06124 597 aaPredicted RBP24.52■■□□□ 1.52
RAB40B-201ENST00000269347 KCTD16Q68DU8 428 aa24.52■■□□□ 1.52
RAB40B-201ENST00000269347 ERICH1Q86X53 443 aa24.52■■□□□ 1.52
RAB40B-201ENST00000269347 C12orf50Q8NA57 414 aaPredicted RBP24.52■■□□□ 1.52
RAB40B-201ENST00000269347 RNF25Q96BH1 459 aaPredicted RBP24.52■■□□□ 1.52
RAB40B-201ENST00000269347 LRRC19Q9H756 370 aa24.52■■□□□ 1.52
RAB40B-201ENST00000269347 SCINQ9Y6U3 715 aa24.52■■□□□ 1.52
RAB40B-201ENST00000269347 FAM187AA6NFU0 413 aa24.52■■□□□ 1.52
RAB40B-201ENST00000269347 GOLGA8SH3BPF8 625 aa24.52■■□□□ 1.52
RAB40B-201ENST00000269347 DARSP14868 501 aaKnown RBP24.52■■□□□ 1.52
RAB40B-201ENST00000269347 RFC1P35251 1148 aaPredicted RBP24.52■■□□□ 1.52
RAB40B-201ENST00000269347 PRUNE1Q86TP1 453 aa24.52■■□□□ 1.52
RAB40B-201ENST00000269347 C12orf29Q8N999 325 aa24.52■■□□□ 1.52
RAB40B-201ENST00000269347 FAM114A2Q9NRY5 505 aa24.52■■□□□ 1.52
RAB40B-201ENST00000269347 C2CD2Q9Y426 696 aa24.52■■□□□ 1.52
RAB40B-201ENST00000269347 SMIM35A0A1B0GVV1 85 aa24.51■■□□□ 1.51
RAB40B-201ENST00000269347 PIK3R2O00459 728 aa24.51■■□□□ 1.51
RAB40B-201ENST00000269347 MICAL2O94851 1124 aa24.51■■□□□ 1.51
RAB40B-201ENST00000269347 HSPA6P17066 643 aa24.51■■□□□ 1.51
RAB40B-201ENST00000269347 SSR1P43307 286 aaKnown RBP24.51■■□□□ 1.51
RAB40B-201ENST00000269347 NDST1P52848 882 aa24.51■■□□□ 1.51
RAB40B-201ENST00000269347 PLTPP55058 493 aa24.51■■□□□ 1.51
RAB40B-201ENST00000269347 DNAJC24Q6P3W2 148 aa24.51■■□□□ 1.51
RAB40B-201ENST00000269347 DPH6Q7L8W6 267 aa24.51■■□□□ 1.51
RAB40B-201ENST00000269347 EMC1Q8N766 993 aa24.51■■□□□ 1.51
RAB40B-201ENST00000269347 UBA3Q8TBC4 463 aa24.51■■□□□ 1.51
RAB40B-201ENST00000269347 TMEM176AQ96HP8 235 aa24.51■■□□□ 1.51
RAB40B-201ENST00000269347 APOL6Q9BWW8 343 aa24.51■■□□□ 1.51
RAB40B-201ENST00000269347 KRT10P13645 584 aa24.5■■□□□ 1.51
RAB40B-201ENST00000269347 PSMC4P43686 418 aa24.5■■□□□ 1.51
RAB40B-201ENST00000269347 LMAN1P49257 510 aa24.5■■□□□ 1.51
RAB40B-201ENST00000269347 SGO2Q562F6 1265 aa24.5■■□□□ 1.51
RAB40B-201ENST00000269347 RHOT1Q8IXI2 618 aa24.5■■□□□ 1.51
RAB40B-201ENST00000269347 CCDC105Q8IYK2 499 aa24.5■■□□□ 1.51
RAB40B-201ENST00000269347 PIWIL1Q96J94 861 aaKnown RBP24.5■■□□□ 1.51
RAB40B-201ENST00000269347 SNX27Q96L92 541 aa24.5■■□□□ 1.51
RAB40B-201ENST00000269347 MRPL45Q9BRJ2 306 aaKnown RBP24.5■■□□□ 1.51
RAB40B-201ENST00000269347 ADPGKQ9BRR6 497 aa24.5■■□□□ 1.51
RAB40B-201ENST00000269347 GCOM2Q9BZD3 368 aaPredicted RBP24.5■■□□□ 1.51
RAB40B-201ENST00000269347 CALB1P05937 261 aa24.5■■□□□ 1.51
RAB40B-201ENST00000269347 SLC10A3P09131 477 aa24.5■■□□□ 1.51
RAB40B-201ENST00000269347 DHX9Q08211 1270 aaKnown RBP24.5■■□□□ 1.51
RAB40B-201ENST00000269347 ZBTB6Q15916 424 aa24.5■■□□□ 1.51
RAB40B-201ENST00000269347 RAB6CQ53S08 254 aa24.5■■□□□ 1.51
RAB40B-201ENST00000269347 RAB6CQ9H0N0 254 aa24.5■■□□□ 1.51
RAB40B-201ENST00000269347 RAB17Q9H0T7 212 aa24.5■■□□□ 1.51
RAB40B-201ENST00000269347 KLK14Q9P0G3 267 aa24.5■■□□□ 1.51
RAB40B-201ENST00000269347 TULP2O00295 520 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 PSTPIP1O43586 416 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 IGFBP6P24592 240 aaPredicted RBP24.49■■□□□ 1.51
RAB40B-201ENST00000269347 SNX17Q15036 470 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 SLC27A1Q6PCB7 646 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 XYLT1Q86Y38 959 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 CCDC50Q8IVM0 306 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 KATNAL2Q8IYT4 538 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 C3orf20Q8ND61 904 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.49■■□□□ 1.51
RAB40B-201ENST00000269347 DCLK3Q9C098 648 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 LHX5Q9H2C1 402 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 PSD3Q9NYI0 1048 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 ITGA11Q9UKX5 1188 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.49■■□□□ 1.51
RAB40B-201ENST00000269347 PAEPP09466 180 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 ATICP31939 592 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 GPD2P43304 727 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 UBXN11Q5T124 520 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 ALKAL1Q6UXT8 129 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 RAPGEF5Q92565 580 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 ZNF518BQ9C0D4 1074 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 IP6K2Q9UHH9 426 aa24.49■■□□□ 1.51
RAB40B-201ENST00000269347 RECQL4O94761 1208 aa24.48■■□□□ 1.51
RAB40B-201ENST00000269347 PFKMP08237 780 aa24.48■■□□□ 1.51
RAB40B-201ENST00000269347 TRIP13Q15645 432 aaPredicted RBP24.48■■□□□ 1.51
RAB40B-201ENST00000269347 PPP2R5EQ16537 467 aa24.48■■□□□ 1.51
RAB40B-201ENST00000269347 MFSD7Q6UXD7 560 aa24.48■■□□□ 1.51
RAB40B-201ENST00000269347 ARRDC4Q8NCT1 418 aa24.48■■□□□ 1.51
RAB40B-201ENST00000269347 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.48■■□□□ 1.51
RAB40B-201ENST00000269347 PKNOX2Q96KN3 472 aa24.48■■□□□ 1.51
RAB40B-201ENST00000269347 FMO2Q99518 471 aa24.48■■□□□ 1.51
RAB40B-201ENST00000269347 GOLGA6CA6NDK9 693 aa24.47■■□□□ 1.51
RAB40B-201ENST00000269347 TNPO2O14787 897 aaKnown RBP24.47■■□□□ 1.51
RAB40B-201ENST00000269347 GOLGA6DP0CG33 693 aa24.47■■□□□ 1.51
RAB40B-201ENST00000269347 IL1R2P27930 398 aa24.47■■□□□ 1.51
RAB40B-201ENST00000269347 RBP5P82980 135 aa24.47■■□□□ 1.51
RAB40B-201ENST00000269347 PURAQ00577 322 aaKnown RBP24.47■■□□□ 1.51
RAB40B-201ENST00000269347 INCA1Q0VD86 236 aa24.47■■□□□ 1.51
RAB40B-201ENST00000269347 TRIM32Q13049 653 aa24.47■■□□□ 1.51
RAB40B-201ENST00000269347 CLUL1Q15846 466 aa24.47■■□□□ 1.51
RAB40B-201ENST00000269347 DNAJC21Q5F1R6 531 aaKnown RBP24.47■■□□□ 1.51
RAB40B-201ENST00000269347 TRNP1Q6NT89 227 aa24.47■■□□□ 1.51
RAB40B-201ENST00000269347 DCUN1D2Q6PH85 259 aa24.47■■□□□ 1.51
RAB40B-201ENST00000269347 WNT8BQ93098 351 aa24.47■■□□□ 1.51
RAB40B-201ENST00000269347 HEXIM2Q96MH2 286 aaKnown RBP24.47■■□□□ 1.51
RAB40B-201ENST00000269347 OSBPL8Q9BZF1 889 aa24.47■■□□□ 1.51
RAB40B-201ENST00000269347 GOLGA2P5Q9HBQ8 144 aa24.47■■□□□ 1.51
RAB40B-201ENST00000269347 GOLGA6AQ9NYA3 693 aa24.47■■□□□ 1.51
RAB40B-201ENST00000269347 MTUS1Q9ULD2 1270 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms