RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 PIN4Q9Y237 131 aaKnown RBP17.62■□□□□ 0.41
CCDC40-201ENST00000269318 PPEF2O14830 753 aa17.61■□□□□ 0.41
CCDC40-201ENST00000269318 GSCP56915 257 aaPredicted RBP17.61■□□□□ 0.41
CCDC40-201ENST00000269318 OGDHQ02218 1023 aa17.61■□□□□ 0.41
CCDC40-201ENST00000269318 TAP1Q03518 808 aa17.61■□□□□ 0.41
CCDC40-201ENST00000269318 MYO1EQ12965 1108 aa17.61■□□□□ 0.41
CCDC40-201ENST00000269318 HLTFQ14527 1009 aaKnown RBP eCLIP17.61■□□□□ 0.41
CCDC40-201ENST00000269318 HSP90B2PQ58FF3 399 aa17.61■□□□□ 0.41
CCDC40-201ENST00000269318 CYP4A22Q5TCH4 519 aa17.61■□□□□ 0.41
CCDC40-201ENST00000269318 KATNAL2Q8IYT4 538 aa17.61■□□□□ 0.41
CCDC40-201ENST00000269318 TTC39CQ8N584 583 aa17.61■□□□□ 0.41
CCDC40-201ENST00000269318 MCEEQ96PE7 176 aa17.61■□□□□ 0.41
CCDC40-201ENST00000269318 ERP44Q9BS26 406 aa17.61■□□□□ 0.41
CCDC40-201ENST00000269318 HERPUD2Q9BSE4 406 aa17.61■□□□□ 0.41
CCDC40-201ENST00000269318 TRIM6Q9C030 488 aaPredicted RBP17.61■□□□□ 0.41
CCDC40-201ENST00000269318 UPF3AQ9H1J1 476 aaKnown RBP17.61■□□□□ 0.41
CCDC40-201ENST00000269318 FAM114A2Q9NRY5 505 aa17.61■□□□□ 0.41
CCDC40-201ENST00000269318 LCMT1Q9UIC8 334 aa17.61■□□□□ 0.41
CCDC40-201ENST00000269318 STRIP2Q9ULQ0 834 aa17.61■□□□□ 0.41
CCDC40-201ENST00000269318 TRIP11Q15643 1979 aa17.61■□□□□ 0.41
CCDC40-201ENST00000269318 MICAL2O94851 1124 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 VDRP11473 427 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 NDST1P52848 882 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 CNGA2Q16280 664 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 XKR4Q5GH76 650 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 ALS2CLQ60I27 953 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 LRRC52Q8N7C0 313 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 C18orf25Q96B23 403 aaPredicted RBP17.6■□□□□ 0.41
CCDC40-201ENST00000269318 MTG1Q9BT17 334 aaPredicted RBP17.6■□□□□ 0.41
CCDC40-201ENST00000269318 LRRC19Q9H756 370 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 TJP2Q9UDY2 1190 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 HMGCRP04035 888 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 AKAP5P24588 427 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 COILP38432 576 aaPredicted RBP17.6■□□□□ 0.41
CCDC40-201ENST00000269318 HSPA9P38646 679 aaKnown RBP17.6■□□□□ 0.41
CCDC40-201ENST00000269318 FNTAP49354 379 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 NKX3-2P78367 333 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 GNASQ5JWF2 1037 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 MFSD14CQ5VZR4 134 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 TAF2Q6P1X5 1199 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 CCDC137Q6PK04 289 aaKnown RBP17.6■□□□□ 0.41
CCDC40-201ENST00000269318 NIPA2Q8N8Q9 360 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 BEST2Q8NFU1 509 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 RIN2Q8WYP3 895 aaPredicted RBP17.6■□□□□ 0.41
CCDC40-201ENST00000269318 CPXM1Q96SM3 734 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 USTQ9Y2C2 406 aa17.6■□□□□ 0.41
CCDC40-201ENST00000269318 GPD2P43304 727 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 FLT3LGP49771 235 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 DRG2P55039 364 aaKnown RBP17.59■□□□□ 0.41
CCDC40-201ENST00000269318 KLF1Q13351 362 aaPredicted RBP17.59■□□□□ 0.41
CCDC40-201ENST00000269318 GLRA4Q5JXX5 417 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 DCUN1D2Q6PH85 259 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 IQCKQ8N0W5 287 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 HEXIM2Q96MH2 286 aaKnown RBP17.59■□□□□ 0.41
CCDC40-201ENST00000269318 RUNDC3BQ96NL0 473 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 SH3GL2Q99962 352 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 DPH5Q9H2P9 285 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 PRDM10Q9NQV6 1147 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 KIAA1257Q9ULG3 409 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 FAN1Q9Y2M0 1017 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 SCN10AQ9Y5Y9 1956 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 PDCD11Q14690 1871 aaKnown RBP17.59■□□□□ 0.41
CCDC40-201ENST00000269318 SIGLEC16A6NMB1 481 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 ERBB2P04626 1255 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 TCF4P15884 667 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 CYP3A5P20815 502 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 LLGL1Q15334 1064 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 SGO2Q562F6 1265 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 LRRC38Q5VT99 294 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 C9orf57Q5W0N0 161 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 EXD1Q8NHP7 514 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 PIK3R5Q8WYR1 880 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 SLCO2A1Q92959 643 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 NT5C1AQ9BXI3 368 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 RNF39Q9H2S5 420 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 GTF2IRD1Q9UHL9 959 aa17.59■□□□□ 0.41
CCDC40-201ENST00000269318 UBQLN1Q9UMX0 589 aaKnown RBP17.59■□□□□ 0.41
CCDC40-201ENST00000269318 SCN1AP35498 2009 aa17.58■□□□□ 0.41
CCDC40-201ENST00000269318 SMIM28A0A1B0GU29 152 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 F8VP50 259 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 M0QYV0 167 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 PGK1P00558 417 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 KCNE1P15382 129 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 GABRB2P47870 512 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 PIGHQ14442 188 aaPredicted RBP17.58■□□□□ 0.4
CCDC40-201ENST00000269318 LCLAT1Q6UWP7 414 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 CXCL17Q6UXB2 119 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 ANKS1BQ7Z6G8 1248 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 FAM228AQ86W67 206 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 XYLT1Q86Y38 959 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 MAIP1Q8WWC4 291 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 ZIM3Q96PE6 472 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 MRPL45Q9BRJ2 306 aaKnown RBP17.58■□□□□ 0.4
CCDC40-201ENST00000269318 APOL6Q9BWW8 343 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 TRIM31Q9BZY9 425 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 ZDHHC18Q9NUE0 388 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 WDR35Q9P2L0 1181 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 RASAL2Q9UJF2 1139 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 NME7Q9Y5B8 376 aa17.58■□□□□ 0.4
CCDC40-201ENST00000269318 SNX9Q9Y5X1 595 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms