RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 WARSP23381 471 aaKnown RBP14.98□□□□□ -0.01
SS18-201ENST00000269137 SSTR3P32745 418 aaPredicted RBP14.98□□□□□ -0.01
SS18-201ENST00000269137 GNL1P36915 607 aaPredicted RBP14.98□□□□□ -0.01
SS18-201ENST00000269137 CLCNKBP51801 687 aa14.98□□□□□ -0.01
SS18-201ENST00000269137 ORC1Q13415 861 aa14.98□□□□□ -0.01
SS18-201ENST00000269137 TUSC3Q13454 348 aa14.98□□□□□ -0.01
SS18-201ENST00000269137 TRIM60Q495X7 471 aa14.98□□□□□ -0.01
SS18-201ENST00000269137 C11orf63Q6NUN7 778 aa14.98□□□□□ -0.01
SS18-201ENST00000269137 DENND1BQ6P3S1 775 aa14.98□□□□□ -0.01
SS18-201ENST00000269137 LCLAT1Q6UWP7 414 aa14.98□□□□□ -0.01
SS18-201ENST00000269137 DAAM2Q86T65 1068 aa14.98□□□□□ -0.01
SS18-201ENST00000269137 CRYBG2Q8N1P7 616 aa14.98□□□□□ -0.01
SS18-201ENST00000269137 OR6B3Q8NGW1 331 aa14.98□□□□□ -0.01
SS18-201ENST00000269137 UROC1Q96N76 676 aa14.98□□□□□ -0.01
SS18-201ENST00000269137 NUP85Q9BW27 656 aa14.98□□□□□ -0.01
SS18-201ENST00000269137 TMEM161AQ9NX61 479 aa14.98□□□□□ -0.01
SS18-201ENST00000269137 HYOU1Q9Y4L1 999 aa14.98□□□□□ -0.01
SS18-201ENST00000269137 NME7Q9Y5B8 376 aa14.98□□□□□ -0.01
SS18-201ENST00000269137 FAM170AA1A519 330 aa14.97□□□□□ -0.01
SS18-201ENST00000269137 CYB561D2O14569 222 aa14.97□□□□□ -0.01
SS18-201ENST00000269137 CTIFO43310 598 aaKnown RBP14.97□□□□□ -0.01
SS18-201ENST00000269137 ATMINO43313 823 aaPredicted RBP14.97□□□□□ -0.01
SS18-201ENST00000269137 POMCP01189 267 aa14.97□□□□□ -0.01
SS18-201ENST00000269137 CALB1P05937 261 aa14.97□□□□□ -0.01
SS18-201ENST00000269137 RRM1P23921 792 aa14.97□□□□□ -0.01
SS18-201ENST00000269137 AARSP49588 968 aaKnown RBP eCLIP14.97□□□□□ -0.01
SS18-201ENST00000269137 MMS22LQ6ZRQ5 1243 aa14.97□□□□□ -0.01
SS18-201ENST00000269137 ADGRF2Q8IZF7 708 aa14.97□□□□□ -0.01
SS18-201ENST00000269137 PDCL2Q8N4E4 241 aa14.97□□□□□ -0.01
SS18-201ENST00000269137 C1orf131Q8NDD1 294 aaKnown RBP14.97□□□□□ -0.01
SS18-201ENST00000269137 ZNF564Q8TBZ8 553 aaPredicted RBP14.97□□□□□ -0.01
SS18-201ENST00000269137 DIS3LQ8TF46 1054 aaKnown RBP14.97□□□□□ -0.01
SS18-201ENST00000269137 C11orf70Q9BRQ4 267 aa14.97□□□□□ -0.01
SS18-201ENST00000269137 SNX25Q9H3E2 840 aa14.97□□□□□ -0.01
SS18-201ENST00000269137 TBX21Q9UL17 535 aa14.97□□□□□ -0.01
SS18-201ENST00000269137 STXBP5LQ9Y2K9 1186 aa14.97□□□□□ -0.01
SS18-201ENST00000269137 TANC1Q9C0D5 1861 aa14.97□□□□□ -0.01
SS18-201ENST00000269137 A8MXQ7 604 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 NCK2O43639 380 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 MICAL2O94851 1124 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 FGFR1P11362 822 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 TTC3P53804 2025 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 RPS6KA1Q15418 735 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 CLLU1OSQ5K130 101 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 ARHGAP17Q68EM7 881 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 PLEKHA7Q6IQ23 1121 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 PEX26Q7Z412 305 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 ACOT1Q86TX2 421 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 NT5DC3Q86UY8 548 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 TMEM86AQ8N2M4 240 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 CEP112Q8N8E3 955 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 SENP8Q96LD8 212 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 OSBPL9Q96SU4 736 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 CARD6Q9BX69 1037 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 WNT8AQ9H1J5 351 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 KANSL3Q9P2N6 904 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 INPP5FQ9Y2H2 1132 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 CASTOR2A6NHX0 329 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 GABRDO14764 452 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 KIF4AO95239 1232 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 NOMO2Q5JPE7 1267 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 ERICH1Q86X53 443 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 SPATA18Q8TC71 538 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 GOLPH3Q9H4A6 298 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 MRPL47Q9HD33 250 aaKnown RBP14.96□□□□□ -0.01
SS18-201ENST00000269137 CHORDC1Q9UHD1 332 aaPredicted RBP14.96□□□□□ -0.01
SS18-201ENST00000269137 AMFRQ9UKV5 643 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 SCINQ9Y6U3 715 aa14.96□□□□□ -0.01
SS18-201ENST00000269137 CES2O00748 559 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 SRGAP2O75044 1071 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 HSPA1AP0DMV8 641 aaKnown RBP14.95□□□□□ -0.02
SS18-201ENST00000269137 HSPA1BP0DMV9 641 aaKnown RBP14.95□□□□□ -0.02
SS18-201ENST00000269137 IBSPP21815 317 aaPredicted RBP14.95□□□□□ -0.02
SS18-201ENST00000269137 IGFBP6P24592 240 aaPredicted RBP14.95□□□□□ -0.02
SS18-201ENST00000269137 GPD2P43304 727 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 DSC1Q08554 894 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 MAMLD1Q13495 774 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 DCLRE1AQ6PJP8 1040 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 C12orf29Q8N999 325 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 C3orf58Q8NDZ4 430 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 MNS1Q8NEH6 495 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 URGCPQ8TCY9 931 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 HES6Q96HZ4 224 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 TNIP3Q96KP6 325 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 PAAF1Q9BRP4 392 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 C11orf49Q9H6J7 331 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 PARVAQ9NVD7 372 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 CACNG4Q9UBN1 327 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 STRIP2Q9ULQ0 834 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 ALG6Q9Y672 507 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 SCN5AQ14524 2016 aa14.95□□□□□ -0.02
SS18-201ENST00000269137 M0QYV0 167 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 CAPN15O75808 1086 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 LMO2P25791 158 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 CYP2C18P33260 490 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 CCL23P55773 120 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 GSCP56915 257 aaPredicted RBP14.94□□□□□ -0.02
SS18-201ENST00000269137 PKDCCQ504Y2 493 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 WSCD1Q658N2 575 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 CD300LGQ6UXG3 332 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms