RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 ALDH6A1Q02252 535 aaKnown RBP12.59□□□□□ -0.39
SRRM4-201ENST00000267260 KIZQ2M2Z5 673 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 COBLL1Q53SF7 1204 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 DDX47Q9H0S4 455 aaKnown RBP12.59□□□□□ -0.39
SRRM4-201ENST00000267260 GOLPH3Q9H4A6 298 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 SNX12Q9UMY4 172 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 PCDHA6Q9UN73 950 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 PCDHA8Q9Y5H6 950 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 APBA3O96018 575 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 QARSP47897 775 aaKnown RBP12.59□□□□□ -0.39
SRRM4-201ENST00000267260 PTK7Q13308 1070 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 LPCAT2Q7L5N7 544 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 RMND5AQ9H871 391 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 ECDO95905 644 aaPredicted RBP12.59□□□□□ -0.39
SRRM4-201ENST00000267260 GRIK1P39086 918 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 SNX17Q15036 470 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 ZCCHC17Q9NP64 241 aaKnown RBP12.59□□□□□ -0.39
SRRM4-201ENST00000267260 ETAA1Q9NY74 926 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 SLC16A3O15427 465 aaKnown RBP12.59□□□□□ -0.39
SRRM4-201ENST00000267260 SNRPAP09012 282 aaKnown RBP12.59□□□□□ -0.39
SRRM4-201ENST00000267260 ZNF341Q9BYN7 854 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 BAG6P46379 1132 aa12.58□□□□□ -0.39
SRRM4-201ENST00000267260 UBE2SQ16763 222 aa12.58□□□□□ -0.39
SRRM4-201ENST00000267260 NAIF1Q69YI7 327 aaPredicted RBP12.58□□□□□ -0.39
SRRM4-201ENST00000267260 PTRHD1Q6GMV3 140 aaKnown RBP12.58□□□□□ -0.39
SRRM4-201ENST00000267260 C3orf62Q6ZUJ4 267 aa12.58□□□□□ -0.39
SRRM4-201ENST00000267260 TRAPPC11Q7Z392 1133 aa12.58□□□□□ -0.39
SRRM4-201ENST00000267260 DHX40Q8IX18 779 aaKnown RBP12.58□□□□□ -0.39
SRRM4-201ENST00000267260 USP33Q8TEY7 942 aa12.58□□□□□ -0.39
SRRM4-201ENST00000267260 SLC10A4Q96EP9 437 aa12.58□□□□□ -0.39
SRRM4-201ENST00000267260 TRAPPC9Q96Q05 1148 aa12.58□□□□□ -0.39
SRRM4-201ENST00000267260 RBM15Q96T37 977 aaKnown RBP eCLIP12.58□□□□□ -0.39
SRRM4-201ENST00000267260 STK33Q9BYT3 514 aa12.58□□□□□ -0.39
SRRM4-201ENST00000267260 DOLKQ9UPQ8 538 aa12.58□□□□□ -0.39
SRRM4-201ENST00000267260 USP10Q14694 798 aaKnown RBP12.58□□□□□ -0.4
SRRM4-201ENST00000267260 PFKFB3Q16875 520 aaPredicted RBP12.58□□□□□ -0.4
SRRM4-201ENST00000267260 C2CD6Q53TS8 623 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 AGAP9Q5VTM2 703 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 SDE2Q6IQ49 451 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 CYB5D1Q6P9G0 228 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 FOXP4Q8IVH2 680 aaPredicted RBP12.58□□□□□ -0.4
SRRM4-201ENST00000267260 NMD3Q96D46 503 aaKnown RBP12.58□□□□□ -0.4
SRRM4-201ENST00000267260 ARMC7Q9H6L4 198 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 PTCH1Q13635 1447 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 CYP2D7A0A087X1C5 515 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 IL6STP40189 918 aaPredicted RBP12.58□□□□□ -0.4
SRRM4-201ENST00000267260 CDK8P49336 464 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 EFNA5P52803 228 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 BNIPLQ7Z465 357 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 RAB6BQ9NRW1 208 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 MAPK1P28482 360 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 HOXA13P31271 388 aaPredicted RBP12.58□□□□□ -0.4
SRRM4-201ENST00000267260 UXS1Q8NBZ7 420 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 SERPINB12Q96P63 405 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 FAM49AQ9H0Q0 323 aaPredicted RBP12.58□□□□□ -0.4
SRRM4-201ENST00000267260 DCLRE1BQ9H816 532 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 HSMCR30P0CW71 290 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 ZNF23P17027 643 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 S100A1P23297 94 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 NDUFAF6Q330K2 333 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 TTLL9Q3SXZ7 439 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 ANKS6Q68DC2 871 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 EXD1Q8NHP7 514 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 SCFD2Q8WU76 684 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 MPP4Q96JB8 637 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 SPON2Q9BUD6 331 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 C6orf62Q9GZU0 229 aaPredicted RBP12.58□□□□□ -0.4
SRRM4-201ENST00000267260 RMI1Q9H9A7 625 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 MARCOQ9UEW3 520 aaPredicted RBP12.58□□□□□ -0.4
SRRM4-201ENST00000267260 EIF3LQ9Y262 564 aaKnown RBP12.58□□□□□ -0.4
SRRM4-201ENST00000267260 PHF20L1A8MW92 1017 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 CHI3L1P36222 383 aaPredicted RBP12.58□□□□□ -0.4
SRRM4-201ENST00000267260 KIF2BQ8N4N8 673 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 ABCB11O95342 1321 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 AFDNP55196 1824 aaKnown RBP12.58□□□□□ -0.4
SRRM4-201ENST00000267260 FAM200BP0CF97 657 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 SCP2P22307 547 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 FCHO2Q0JRZ9 810 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 TSNQ15631 228 aaKnown RBP12.58□□□□□ -0.4
SRRM4-201ENST00000267260 CENPLQ8N0S6 344 aaPredicted RBP12.58□□□□□ -0.4
SRRM4-201ENST00000267260 GUF1Q8N442 669 aaKnown RBP12.58□□□□□ -0.4
SRRM4-201ENST00000267260 C1orf54Q8WWF1 131 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 NOL6Q9H6R4 1146 aaKnown RBP12.58□□□□□ -0.4
SRRM4-201ENST00000267260 COPG2Q9UBF2 871 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 AMACRQ9UHK6 382 aa12.58□□□□□ -0.4
SRRM4-201ENST00000267260 RFX7Q2KHR2 1363 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 GUCY1A2P33402 732 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 SULT1E1P49888 294 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 NUDT2P50583 147 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 POU4F1Q01851 419 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 DDR2Q16832 855 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 ZNF438Q7Z4V0 828 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 ADCK2Q7Z695 626 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 DDX53Q86TM3 631 aaKnown RBP12.57□□□□□ -0.4
SRRM4-201ENST00000267260 L3MBTL3Q96JM7 780 aaPredicted RBP12.57□□□□□ -0.4
SRRM4-201ENST00000267260 AGPAT1Q99943 283 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 PACSIN1Q9BY11 444 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 FAM192AQ9GZU8 254 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 SPASTQ9UBP0 616 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 IFNA14P01570 189 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms