RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 NPY5RQ15761 445 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 STK32AQ8WU08 396 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 ATG4CQ96DT6 458 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 NRBF2Q96F24 287 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 CCDC90BQ9GZT6 254 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 CCDC68Q9H2F9 335 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 MID2Q9UJV3 735 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 AURKCQ9UQB9 309 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 AFDNP55196 1824 aaKnown RBP12.09□□□□□ -0.47
VPS33A-201ENST00000267199 ENTPD5O75356 428 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 CALB2P22676 271 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 GEMIN4P57678 1058 aaKnown RBP12.09□□□□□ -0.47
VPS33A-201ENST00000267199 CATSPER4Q7RTX7 472 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 RIBC1Q8N443 379 aaPredicted RBP12.09□□□□□ -0.47
VPS33A-201ENST00000267199 INPP4AQ96PE3 977 aaPredicted RBP12.09□□□□□ -0.47
VPS33A-201ENST00000267199 CYP26B1Q9NR63 512 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 ARMCX1Q9P291 453 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 ZNRF3Q9ULT6 936 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 IGSF9BQ9UPX0 1349 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 DNM1LO00429 736 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 RARAP10276 462 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 CA8P35219 290 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 CYLC2Q14093 348 aaPredicted RBP12.09□□□□□ -0.47
VPS33A-201ENST00000267199 SEZ6Q53EL9 994 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 OTOP1Q7RTM1 612 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 MREGQ8N565 214 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 RMDN2Q96LZ7 410 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 CNBD2Q96M20 576 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 PAIP2BQ9ULR5 123 aaKnown RBP12.09□□□□□ -0.47
VPS33A-201ENST00000267199 C2CD2Q9Y426 696 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 NFIBO00712 420 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 KIAA0391O15091 583 aaKnown RBP12.09□□□□□ -0.47
VPS33A-201ENST00000267199 MGEA5O60502 916 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 NPTX2P47972 431 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 CBWD6Q4V339 395 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 CBWD3Q5JTY5 395 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 CBWD5Q5RIA9 395 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 APOBEC3HQ6NTF7 200 aaKnown RBP12.09□□□□□ -0.47
VPS33A-201ENST00000267199 IYDQ6PHW0 289 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 SIX6OS1Q8N1H7 587 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 PARD3BQ8TEW8 1205 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 C2orf40Q9H1Z8 148 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 MCM8Q9UJA3 840 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 TMX2Q9Y320 296 aa12.09□□□□□ -0.47
VPS33A-201ENST00000267199 SHOX2O60902 331 aaPredicted RBP12.08□□□□□ -0.48
VPS33A-201ENST00000267199 LGR5O75473 907 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 PRKCBP05771 671 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 KRT16P08779 473 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 OSBPP22059 807 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 GTF2H1P32780 548 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 PHKA2P46019 1235 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 EFNA5P52803 228 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 SNRPFP62306 86 aaKnown RBP12.08□□□□□ -0.48
VPS33A-201ENST00000267199 CCNA1P78396 465 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 TAP1Q03518 808 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 NFX1Q12986 1120 aaKnown RBP12.08□□□□□ -0.48
VPS33A-201ENST00000267199 HEATR6Q6AI08 1181 aaKnown RBP12.08□□□□□ -0.48
VPS33A-201ENST00000267199 LRRC8EQ6NSJ5 796 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 APTXQ7Z2E3 356 aaKnown RBP12.08□□□□□ -0.48
VPS33A-201ENST00000267199 RNF135Q8IUD6 432 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 FAM71DQ8N9W8 422 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 FEZF2Q8TBJ5 459 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 SCG3Q8WXD2 468 aaKnown RBP12.08□□□□□ -0.48
VPS33A-201ENST00000267199 OSBPL7Q9BZF2 842 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 FAM96AQ9H5X1 160 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 DHX35Q9H5Z1 703 aaKnown RBP12.08□□□□□ -0.48
VPS33A-201ENST00000267199 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.08□□□□□ -0.48
VPS33A-201ENST00000267199 ICAM1P05362 532 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 CNGA2Q16280 664 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 PRAMEF18Q5VWM3 479 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 SV2AQ7L0J3 742 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 PTF1AQ7RTS3 328 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 SCUBE1Q8IWY4 988 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 GMCL1P1Q8NEA9 526 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 ATXN2LQ8WWM7 1075 aaKnown RBP12.08□□□□□ -0.48
VPS33A-201ENST00000267199 TMEM120AQ9BXJ8 343 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 NACA2Q9H009 215 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 RNPEPL1Q9HAU8 725 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 WHRNQ9P202 907 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 CNOT7Q9UIV1 285 aaKnown RBP12.08□□□□□ -0.48
VPS33A-201ENST00000267199 ARHGAP26Q9UNA1 814 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 LRCH1Q9Y2L9 728 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 DCAF8L1A6NGE4 600 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 AP3M2P53677 418 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 DDR1Q08345 913 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 SPATA18Q8TC71 538 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 CCT7Q99832 543 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 CAAP1Q9H8G2 361 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 A8MUI8 341 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 ATP4AP20648 1035 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 PCYT1AP49585 367 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 RASA2Q15283 850 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 ECM1Q16610 540 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 PCNX4Q63HM2 1172 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 ZNF772Q68DY9 489 aaPredicted RBP12.08□□□□□ -0.48
VPS33A-201ENST00000267199 GPAT2Q6NUI2 795 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 KCNK16Q96T55 309 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 GANQ9H2C0 597 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 SALL4Q9UJQ4 1053 aa12.08□□□□□ -0.48
VPS33A-201ENST00000267199 GAKO14976 1311 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms