RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 R3HDM1Q15032 1099 aaKnown RBP11.61□□□□□ -0.55
CHFR-201ENST00000266880 PID1Q7Z2X4 250 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 PEX5LQ8IYB4 626 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 RCOR2Q8IZ40 523 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 DYNLL2Q96FJ2 89 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 SLC52A2Q9HAB3 445 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 KRCC1Q9NPI7 259 aaPredicted RBP11.61□□□□□ -0.55
CHFR-201ENST00000266880 THOC2Q8NI27 1593 aaKnown RBP11.61□□□□□ -0.55
CHFR-201ENST00000266880 RAD51CO43502 376 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 DNAJC7Q99615 494 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 PIGUQ9H490 435 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 CDH16O75309 829 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 PLEKHA8P1O95397 391 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 MROH9Q5TGP6 573 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 C3orf20Q8ND61 904 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 SHCBP1Q8NEM2 672 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 SKA1Q96BD8 255 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 CHL1O00533 1208 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 SSNA1O43805 119 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 ZNF568Q3ZCX4 644 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 ZBTB49Q6ZSB9 765 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 RAD54LQ92698 747 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 E2F7Q96AV8 911 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 CARD14Q9BXL6 1004 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 PNMA6FA0A0J9YX94 578 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 DYNLL1P63167 89 aaKnown RBP11.61□□□□□ -0.55
CHFR-201ENST00000266880 FCHO2Q0JRZ9 810 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 RNF19BQ6ZMZ0 732 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 CLVS1Q8IUQ0 354 aaPredicted RBP11.61□□□□□ -0.55
CHFR-201ENST00000266880 SLC44A2Q8IWA5 706 aaPredicted RBP11.61□□□□□ -0.55
CHFR-201ENST00000266880 CHMP1AQ9HD42 196 aaPredicted RBP11.61□□□□□ -0.55
CHFR-201ENST00000266880 ATMINO43313 823 aaPredicted RBP11.61□□□□□ -0.55
CHFR-201ENST00000266880 SCRN3Q0VDG4 424 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 ATG14Q6ZNE5 492 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 APOL4Q9BPW4 351 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 USP17L3A6NCW0 530 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 USP17L4A6NCW7 530 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 PRKAB2O43741 272 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 PDE9AO76083 593 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 FAM58BPP0C7Q3 252 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.61□□□□□ -0.55
CHFR-201ENST00000266880 USP17L1Q7RTZ2 530 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 RMND5BQ96G75 393 aaPredicted RBP11.61□□□□□ -0.55
CHFR-201ENST00000266880 GRIP2Q9C0E4 1043 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 PLEKHA5Q9HAU0 1116 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 RAB6BQ9NRW1 208 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 WBP11Q9Y2W2 641 aaKnown RBP11.61□□□□□ -0.55
CHFR-201ENST00000266880 S100A1P23297 94 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 MAGEA4P43358 317 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 EIF2B5Q13144 721 aaKnown RBP11.61□□□□□ -0.55
CHFR-201ENST00000266880 ITGADQ13349 1161 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 EFHBQ8N7U6 833 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 XXYLT1Q8NBI6 393 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 ANKRD7Q92527 254 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 MAML3Q96JK9 1138 aa11.61□□□□□ -0.55
CHFR-201ENST00000266880 LOC100506127A0A0U1RQW1 187 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 HOXB7P09629 217 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 CHRNB3Q05901 458 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 CCNI2Q6ZMN8 369 aaPredicted RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 C3orf62Q6ZUJ4 267 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 EPS8L3Q8TE67 593 aaKnown RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 IARS2Q9NSE4 1012 aaKnown RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 COPG2Q9UBF2 871 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 BAIAP3O94812 1187 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 LBPP18428 481 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 EIF2S3P41091 472 aaKnown RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 GPATCH4Q5T3I0 446 aaKnown RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 SUGP1Q8IWZ8 645 aaKnown RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 REXO1L1PQ8IX06 675 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 CNOT3O75175 753 aaKnown RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 ITGA8P53708 1063 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 ATN1P54259 1190 aaPredicted RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 DDR2Q16832 855 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 ISLR2Q6UXK2 745 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 SLC30A5Q8TAD4 765 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 SLC35G2Q8TBE7 412 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 SGF29Q96ES7 293 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 PARVAQ9NVD7 372 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 EHD3Q9NZN3 535 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 TRIM64A6NGJ6 449 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 TRIM64BA6NI03 449 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 RAD51BO15315 384 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 PCP11498 1178 aaKnown RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 SERPINH1P50454 418 aaKnown RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 UTYO14607 1347 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 USP17L8P0C7I0 530 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 RPS8P62241 208 aaKnown RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 ASAP3Q8TDY4 903 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 TMCC3Q9ULS5 477 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 S100A6P06703 90 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 EIF2AK2P19525 551 aaKnown RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 POU4F1Q01851 419 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 TYW3Q6IPR3 259 aaKnown RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 TCAIMQ8N3R3 496 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 CHID1Q9BWS9 393 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 AASDHPPTQ9NRN7 309 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 DUSP12Q9UNI6 340 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 POTECB2RU33 542 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 HUS1O60921 280 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 MYL3P08590 195 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms