RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 INPP5DQ92835 1189 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 DCUN1D5Q9BTE7 237 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 PARVAQ9NVD7 372 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 TUBE1Q9UJT0 475 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 AP5Z1O43299 807 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 KLHL41O60662 606 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 CTTNQ14247 550 aaKnown RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 DDX42Q86XP3 938 aaKnown RBP eCLIP5.95□□□□□ -1.46
VCAN-201ENST00000265077 PTPRN2Q92932 1015 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 PPP1R2P1Q96PQ5 205 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 SLC13A1Q9BZW2 595 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 BFARQ9NZS9 450 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 SLC9A2Q9UBY0 812 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 DMTF1Q9Y222 760 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 UTYO14607 1347 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 NEDD4P46934 1319 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 USP17L3A6NCW0 530 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 USP17L4A6NCW7 530 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 UBAP1LF5GYI3 381 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 ZNF185O15231 689 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 CDK8P49336 464 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 CCNA1P78396 465 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 OTUD4Q01804 1114 aaKnown RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 TRADDQ15628 312 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 TTC33Q6PID6 262 aaPredicted RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 USP17L1Q7RTZ2 530 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 TC2NQ8N9U0 490 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 HSPH1Q92598 858 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 HPS1Q92902 700 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 RNPEPQ9H4A4 650 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 NGRNQ9NPE2 291 aaKnown RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 RBM12Q9NTZ6 932 aaKnown RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 PCDHGA4Q9Y5G9 962 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 PPEF1O14829 653 aaPredicted RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 NCK2O43639 380 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 LIN52Q52LA3 116 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 RBM44Q6ZP01 1051 aaKnown RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 RBM43Q6ZSC3 357 aaKnown RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 F5P12259 2224 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 NBNO60934 754 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 FKBP6O75344 327 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 SDC4P31431 198 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 ZNF618Q5T7W0 954 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 HEATR6Q6AI08 1181 aaKnown RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 PACS1Q6VY07 963 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 NEK10Q6ZWH5 1172 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 THTPAQ9BU02 230 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 TUFT1Q9NNX1 390 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 GTSE1Q9NYZ3 720 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 GTF3C4Q9UKN8 822 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 CDY2AQ9Y6F7 541 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 CDY1Q9Y6F8 540 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 DOPEY2Q9Y3R5 2298 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 FAM170AA1A519 330 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 B2RBV5 119 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 PDXKO00764 312 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 ITGA2BP08514 1039 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 COPB2P35606 906 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 ITGADQ13349 1161 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 UGP2Q16851 508 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 TWF2Q6IBS0 349 aaKnown RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 PRUNE1Q86TP1 453 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 COL23A1Q86Y22 540 aaPredicted RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 OLFM1Q99784 485 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 NPHS2Q9NP85 383 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 RPRD1BQ9NQG5 326 aaKnown RBP5.95□□□□□ -1.46
VCAN-201ENST00000265077 STAP1Q9ULZ2 295 aa5.95□□□□□ -1.46
VCAN-201ENST00000265077 METP08581 1390 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 CD58P19256 250 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 ITIH2P19823 946 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 SERPINB9P50453 376 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 NR1H2P55055 460 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 DPYDQ12882 1025 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 NAB2Q15742 525 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 KRT73Q86Y46 540 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 ADSSL1Q8N142 457 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 FRMD8Q9BZ67 464 aaPredicted RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 UBE2OQ9C0C9 1292 aaKnown RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 ADGRB3O60242 1522 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 LMTK3Q96Q04 1460 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 STX7O15400 261 aaKnown RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 FGFR4P22455 802 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 SLC16A2P36021 539 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 PRAMEP78395 509 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 ROR1Q01973 937 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 RC3H1Q5TC82 1133 aaKnown RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 CDCA2Q69YH5 1023 aaPredicted RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 ZBED8Q8IZ13 594 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 MAGEB18Q96M61 343 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 HMG20AQ9NP66 347 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 TRIM64A6NGJ6 449 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 TRIM64BA6NI03 449 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 HOXD12P35452 270 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 CDK17Q00537 523 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 PDIA2Q13087 525 aaKnown RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 HP1BP3Q5SSJ5 553 aaPredicted RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 SPICE1Q8N0Z3 855 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 GDPD5Q8WTR4 605 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 SPATA16Q9BXB7 569 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 TRPV5Q9NQA5 729 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms