RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 KIF9Q9HAQ2 790 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 C17orf75Q9HAS0 396 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 VGLL4Q14135 290 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 MFSD7Q6UXD7 560 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 FAM71AQ8IYT1 594 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 PGM2Q96G03 612 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 DCLK3Q9C098 648 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 ERAP1Q9NZ08 941 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 PHLPP1O60346 1717 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 F8VP50 259 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 ANP32DO95626 131 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 CPP00450 1065 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 PDGFRAP16234 1089 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 EIF3EP60228 445 aaKnown RBP20.84■□□□□ 0.93
CSPG5-201ENST00000264723 TMEM132BQ14DG7 1078 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 CNGA2Q16280 664 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 YIPF3Q9GZM5 350 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 DHX35Q9H5Z1 703 aaKnown RBP20.84■□□□□ 0.93
CSPG5-201ENST00000264723 STRIP2Q9ULQ0 834 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 LAMB4A4D0S4 1761 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 IRF6O14896 467 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 HUS1O60921 280 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 LCP1P13796 627 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 MUTP22033 750 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 KIZQ2M2Z5 673 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 PPP1R2P3Q6NXS1 205 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 FAM193BQ96PV7 902 aaPredicted RBP20.84■□□□□ 0.93
CSPG5-201ENST00000264723 TRIM55Q9BYV6 548 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 GCOM2Q9BZD3 368 aaPredicted RBP20.84■□□□□ 0.93
CSPG5-201ENST00000264723 LRRC4CQ9HCJ2 640 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 KLK14Q9P0G3 267 aa20.84■□□□□ 0.93
CSPG5-201ENST00000264723 MYBL1P10243 752 aa20.83■□□□□ 0.93
CSPG5-201ENST00000264723 SSTR1P30872 391 aa20.83■□□□□ 0.93
CSPG5-201ENST00000264723 RFC5P40937 340 aa20.83■□□□□ 0.93
CSPG5-201ENST00000264723 GJC2Q5T442 439 aaPredicted RBP20.83■□□□□ 0.93
CSPG5-201ENST00000264723 RSPH3Q86UC2 560 aa20.83■□□□□ 0.93
CSPG5-201ENST00000264723 GPRC5AQ8NFJ5 357 aa20.83■□□□□ 0.93
CSPG5-201ENST00000264723 COPS5Q92905 334 aa20.83■□□□□ 0.93
CSPG5-201ENST00000264723 CFAP73A6NFT4 308 aa20.83■□□□□ 0.93
CSPG5-201ENST00000264723 CREB3O43889 395 aa20.83■□□□□ 0.93
CSPG5-201ENST00000264723 PROSCO94903 275 aa20.83■□□□□ 0.93
CSPG5-201ENST00000264723 NQO1P15559 274 aaKnown RBP20.83■□□□□ 0.93
CSPG5-201ENST00000264723 RPL7AP62424 266 aaKnown RBP20.83■□□□□ 0.93
CSPG5-201ENST00000264723 RNASELQ05823 741 aaKnown RBP20.83■□□□□ 0.93
CSPG5-201ENST00000264723 SPOUT1Q5T280 376 aaKnown RBP20.83■□□□□ 0.93
CSPG5-201ENST00000264723 NIF3L1Q9GZT8 377 aa20.83■□□□□ 0.93
CSPG5-201ENST00000264723 SLCO1B3Q9NPD5 702 aa20.83■□□□□ 0.93
CSPG5-201ENST00000264723 LPXNO60711 386 aa20.83■□□□□ 0.92
CSPG5-201ENST00000264723 CALRP27797 417 aaKnown RBP20.83■□□□□ 0.92
CSPG5-201ENST00000264723 ASNSD1Q9NWL6 643 aa20.83■□□□□ 0.92
CSPG5-201ENST00000264723 PHTF1Q9UMS5 762 aa20.83■□□□□ 0.92
CSPG5-201ENST00000264723 SIPA1L3O60292 1781 aaPredicted RBP20.83■□□□□ 0.92
CSPG5-201ENST00000264723 SLC25A27O95847 323 aa20.83■□□□□ 0.92
CSPG5-201ENST00000264723 APRTP07741 180 aa20.83■□□□□ 0.92
CSPG5-201ENST00000264723 C6orf222P0C671 652 aaPredicted RBP20.83■□□□□ 0.92
CSPG5-201ENST00000264723 RAP1GAPP47736 663 aa20.83■□□□□ 0.92
CSPG5-201ENST00000264723 MRPS9P82933 396 aaKnown RBP20.83■□□□□ 0.92
CSPG5-201ENST00000264723 PKN2Q16513 984 aaKnown RBP20.83■□□□□ 0.92
CSPG5-201ENST00000264723 LONP2Q86WA8 852 aa20.83■□□□□ 0.92
CSPG5-201ENST00000264723 BEST2Q8NFU1 509 aa20.83■□□□□ 0.92
CSPG5-201ENST00000264723 CCHCR1Q8TD31 782 aa20.83■□□□□ 0.92
CSPG5-201ENST00000264723 LRRN4Q8WUT4 740 aa20.83■□□□□ 0.92
CSPG5-201ENST00000264723 SPDL1Q96EA4 605 aa20.83■□□□□ 0.92
CSPG5-201ENST00000264723 NCANO14594 1321 aa20.83■□□□□ 0.92
CSPG5-201ENST00000264723 COPEO14579 308 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 RBP3P10745 1247 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 PECAM1P16284 738 aaPredicted RBP20.82■□□□□ 0.92
CSPG5-201ENST00000264723 BCAR1P56945 870 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 TMEM132DQ14C87 1099 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 KCNV1Q6PIU1 500 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 TMEM161BQ8NDZ6 487 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 SHC3Q92529 594 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 CYP39A1Q9NYL5 469 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 OGTO15294 1046 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 HBP1O60381 514 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 SLFN11Q7Z7L1 901 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 RCOR2Q8IZ40 523 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 AFG1LQ8WV93 481 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 OPTNQ96CV9 577 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 RAB6BQ9NRW1 208 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 ADARB2Q9NS39 739 aaKnown RBP20.82■□□□□ 0.92
CSPG5-201ENST00000264723 SLC12A6Q9UHW9 1150 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 ATP6V1G2O95670 118 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 NAMPTP43490 491 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 TAS2R40P59535 323 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 NME3Q13232 169 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 TAF1CQ15572 869 aaPredicted RBP20.82■□□□□ 0.92
CSPG5-201ENST00000264723 SDCCAG8Q86SQ7 713 aaPredicted RBP20.82■□□□□ 0.92
CSPG5-201ENST00000264723 CPB2Q96IY4 423 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 FHDC1Q9C0D6 1143 aaPredicted RBP20.82■□□□□ 0.92
CSPG5-201ENST00000264723 SMYD2Q9NRG4 433 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 WHRNQ9P202 907 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 UBIAD1Q9Y5Z9 338 aa20.82■□□□□ 0.92
CSPG5-201ENST00000264723 DCTN3O75935 186 aa20.81■□□□□ 0.92
CSPG5-201ENST00000264723 ARFIP2P53365 341 aa20.81■□□□□ 0.92
CSPG5-201ENST00000264723 UBAP2Q5T6F2 1119 aaKnown RBP20.81■□□□□ 0.92
CSPG5-201ENST00000264723 ATXN7L3BQ96GX2 97 aa20.81■□□□□ 0.92
CSPG5-201ENST00000264723 ASCC2Q9H1I8 757 aaPredicted RBP20.81■□□□□ 0.92
CSPG5-201ENST00000264723 KDM4CQ9H3R0 1056 aa20.81■□□□□ 0.92
CSPG5-201ENST00000264723 A0A087WZ62 844 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms