RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 GLRA2P23416 452 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 GCLCP48506 637 aaPredicted RBP13.04□□□□□ -0.32
CHMP3-201ENST00000263856 JAK3P52333 1124 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 PRKCEQ02156 737 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 EAPPQ56P03 285 aaPredicted RBP13.04□□□□□ -0.32
CHMP3-201ENST00000263856 EMC1Q8N766 993 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 HSPH1Q92598 858 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 WNK4Q96J92 1243 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 PDCD2LQ9BRP1 358 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 CALN1Q9BXU9 219 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 LRMDAQ9H2I8 198 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 MARCOQ9UEW3 520 aaPredicted RBP13.04□□□□□ -0.32
CHMP3-201ENST00000263856 IP6K2Q9UHH9 426 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 CST8O60676 142 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 T-ENOLP0DO92 83 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 YARSP54577 528 aaKnown RBP13.04□□□□□ -0.32
CHMP3-201ENST00000263856 KRT76Q01546 638 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 OTUD4Q01804 1114 aaKnown RBP13.04□□□□□ -0.32
CHMP3-201ENST00000263856 RCN1Q15293 331 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 NBPF20Q3BBV1 942 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 MSS51Q4VC12 460 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 ENOSF1Q7L5Y1 443 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 ZC3H18Q86VM9 953 aaKnown RBP13.04□□□□□ -0.32
CHMP3-201ENST00000263856 CDR2LQ86X02 465 aaPredicted RBP13.04□□□□□ -0.32
CHMP3-201ENST00000263856 LARGE2Q8N3Y3 721 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 C10orf82Q8WW14 230 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 FAM151AQ8WW52 585 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 ZNF606Q8WXB4 792 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 SLC7A6OSQ96CW6 309 aaPredicted RBP13.04□□□□□ -0.32
CHMP3-201ENST00000263856 TTC25Q96NG3 672 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 FAM111AQ96PZ2 611 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 MOV10L1Q9BXT6 1211 aaKnown RBP13.04□□□□□ -0.32
CHMP3-201ENST00000263856 NXF1Q9UBU9 619 aaKnown RBP13.04□□□□□ -0.32
CHMP3-201ENST00000263856 FBXO40Q9UH90 709 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 SMG5Q9UPR3 1016 aaKnown RBP13.04□□□□□ -0.32
CHMP3-201ENST00000263856 EME2A4GXA9 379 aaPredicted RBP13.04□□□□□ -0.32
CHMP3-201ENST00000263856 K7ERI5 159 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 GYG2O15488 501 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 SMNDC1O75940 238 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHMP3-201ENST00000263856 HAUS5O94927 633 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 VNN1O95497 513 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 CYP1A1P04798 512 aaPredicted RBP13.04□□□□□ -0.32
CHMP3-201ENST00000263856 TPBGLP0DKB5 382 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 SERPINB3P29508 390 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 GEMIN4P57678 1058 aaKnown RBP13.04□□□□□ -0.32
CHMP3-201ENST00000263856 IRX4P78413 519 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 OGDHQ02218 1023 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 MOGSQ13724 837 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 TSNAXIP1Q2TAA8 658 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 PLEKHG4Q58EX7 1191 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 FNBP1LQ5T0N5 605 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 DSTYKQ6XUX3 929 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 CCDC60Q8IWA6 550 aaPredicted RBP13.04□□□□□ -0.32
CHMP3-201ENST00000263856 ALLCQ8N6M5 410 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 ACTL9Q8TC94 416 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 TJP2Q9UDY2 1190 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 FZD1Q9UP38 647 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 NUMBLQ9Y6R0 609 aa13.04□□□□□ -0.32
CHMP3-201ENST00000263856 ZNF541Q9H0D2 1346 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 TCRBV7S3A2A0A539 114 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 PSMA2P25787 234 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 ACVR2BQ13705 512 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 NCOA4Q13772 614 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 ZACNQ401N2 412 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 RFX6Q8HWS3 928 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 RCOR2Q8IZ40 523 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 RIBC1Q8N443 379 aaPredicted RBP13.03□□□□□ -0.32
CHMP3-201ENST00000263856 CFAP36Q96G28 342 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 IQCGQ9H095 443 aaKnown RBP13.03□□□□□ -0.32
CHMP3-201ENST00000263856 ZNF277Q9NRM2 450 aaPredicted RBP13.03□□□□□ -0.32
CHMP3-201ENST00000263856 ZFATQ9P243 1243 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 RIPK3Q9Y572 518 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 EXTL3O43909 919 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 LPXNO60711 386 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 SMIM24O75264 130 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 ATP5HO75947 161 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 KRT36O76013 467 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 LUC7L3O95232 432 aaKnown RBP13.03□□□□□ -0.32
CHMP3-201ENST00000263856 MT-ND3P03897 115 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 ASNSP08243 561 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 KRT19P08727 400 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 BGNP21810 368 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 ARFIP2P53365 341 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 HIRAP54198 1017 aaPredicted RBP13.03□□□□□ -0.32
CHMP3-201ENST00000263856 GPX6P59796 221 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 NR1H3Q13133 447 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 MTMR2Q13614 643 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 KHDC1Q4VXA5 237 aaKnown RBP13.03□□□□□ -0.32
CHMP3-201ENST00000263856 THEMIS2Q5TEJ8 643 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 FAXCQ5TGI0 409 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 GPAT2Q6NUI2 795 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 TMEM154Q6P9G4 183 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 TAS1R3Q7RTX0 852 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 TTC7BQ86TV6 843 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 FAM71DQ8N9W8 422 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 ARMC2Q8NEN0 867 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 DNAJC9Q8WXX5 260 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 PTPRN2Q92932 1015 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 STMN2Q93045 179 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 ATP6V0A1Q93050 837 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms