RNA–Protein interactions for RNA: ENST00000263671.9

CHRDL2-201, Transcript of chordin like 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRDL2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-201ENST00000263671 ALPK3Q96L96 1907 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 TRIM43BA6NCK2 446 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 F8W810 466 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 URI1O94763 535 aaPredicted RBP13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 B3GAT3O94766 335 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 MICAL2O94851 1124 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 LSM8O95777 96 aaKnown RBP13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 ATP1A1P05023 1023 aaKnown RBP13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 WARSP23381 471 aaKnown RBP13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 LMO2P25791 158 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 CDH5P33151 784 aaPredicted RBP13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 TTC3P53804 2025 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 DSC1Q08554 894 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 SGO2Q562F6 1265 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 WSCD1Q658N2 575 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 CD300LGQ6UXG3 332 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 DPH6Q7L8W6 267 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 UNC93AQ86WB7 457 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 PHF13Q86YI8 300 aaPredicted RBP13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 CRIPAKQ8N1N5 446 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 WDTC1Q8N5D0 677 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 TPCN2Q8NHX9 752 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 HASPINQ8TF76 798 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 TRIM43Q96BQ3 446 aaPredicted RBP13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 DDX27Q96GQ7 796 aaKnown RBP13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 UROC1Q96N76 676 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 LPIN3Q9BQK8 851 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 C11orf70Q9BRQ4 267 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 SNX25Q9H3E2 840 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 GOLPH3Q9H4A6 298 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 PRDM10Q9NQV6 1147 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 GTF3C4Q9UKN8 822 aa13.7□□□□□ -0.22
CHRDL2-201ENST00000263671 FNDC1Q4ZHG4 1894 aaPredicted RBP13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 KIAA0100Q14667 2235 aaKnown RBP13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 I3L4J1 428 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 KIF4AO95239 1232 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 CYP1A2P05177 515 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 ITGB1P05556 798 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 PDGFRBP09619 1106 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 EN2P19622 333 aaPredicted RBP13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 GNL1P36915 607 aaPredicted RBP13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 BRCC3P46736 316 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 PTP4A2Q12974 167 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 TIGD5Q53EQ6 642 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 LLGL2Q6P1M3 1020 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 CNKSR3Q6P9H4 555 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 MMS22LQ6ZRQ5 1243 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 FAM43BQ6ZT52 329 aaPredicted RBP13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 RHOT2Q8IXI1 618 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 TMEM35BQ8NCS4 154 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 CASD1Q96PB1 797 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 FAM49BQ9NUQ9 324 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 CNOT8Q9UFF9 292 aaKnown RBP13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 CYTH4Q9UIA0 394 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 LRFN2Q9ULH4 789 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 STXBP5LQ9Y2K9 1186 aa13.69□□□□□ -0.22
CHRDL2-201ENST00000263671 M0QYV0 167 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 KIAA0355O15063 1070 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 FTCDO95954 541 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 TIMP1P01033 207 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 CAPN2P17655 700 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 MMP8P22894 467 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 RRM1P23921 792 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 RFC2P35250 354 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 TCEAL1Q15170 157 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 CNGA2Q16280 664 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 IFI16Q16666 785 aaKnown RBP13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 DSTYKQ6XUX3 929 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 UBE2Q1Q7Z7E8 422 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 PHLDB2Q86SQ0 1253 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 COLGALT2Q8IYK4 626 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 ABI1Q8IZP0 508 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 LRRC57Q8N9N7 239 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 ZNF518BQ9C0D4 1074 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 LHX5Q9H2C1 402 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 ADAM22Q9P0K1 906 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 CTTNBP2NLQ9P2B4 639 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 KANSL3Q9P2N6 904 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 DNAJB4Q9UDY4 337 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 TSPAN16Q9UKR8 245 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 CEP83Q9Y592 693 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 TIMM13Q9Y5L4 95 aaPredicted RBP13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 COL4A6Q14031 1691 aa13.68□□□□□ -0.22
CHRDL2-201ENST00000263671 RIOK3O14730 519 aaKnown RBP13.67□□□□□ -0.22
CHRDL2-201ENST00000263671 GABRDO14764 452 aa13.67□□□□□ -0.22
CHRDL2-201ENST00000263671 NCK2O43639 380 aa13.67□□□□□ -0.22
CHRDL2-201ENST00000263671 BUB1BO60566 1050 aaPredicted RBP13.67□□□□□ -0.22
CHRDL2-201ENST00000263671 CSF2RAP15509 400 aa13.67□□□□□ -0.22
CHRDL2-201ENST00000263671 HADHBP55084 474 aaKnown RBP13.67□□□□□ -0.22
CHRDL2-201ENST00000263671 AMPD2Q01433 879 aa13.67□□□□□ -0.22
CHRDL2-201ENST00000263671 RNASELQ05823 741 aaKnown RBP13.67□□□□□ -0.22
CHRDL2-201ENST00000263671 CCDC142Q17RM4 750 aa13.67□□□□□ -0.22
CHRDL2-201ENST00000263671 GOLGA7BQ2TAP0 167 aa13.67□□□□□ -0.22
CHRDL2-201ENST00000263671 PPP1R26Q5T8A7 1209 aaPredicted RBP13.67□□□□□ -0.22
CHRDL2-201ENST00000263671 LCLAT1Q6UWP7 414 aa13.67□□□□□ -0.22
CHRDL2-201ENST00000263671 NPAS4Q8IUM7 802 aa13.67□□□□□ -0.22
CHRDL2-201ENST00000263671 TRIM11Q96F44 468 aa13.67□□□□□ -0.22
CHRDL2-201ENST00000263671 NUP85Q9BW27 656 aa13.67□□□□□ -0.22
CHRDL2-201ENST00000263671 L2HGDHQ9H9P8 463 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms