RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 PSTPIP1O43586 416 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 XKR3Q5GH77 459 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 PPIL6Q8IXY8 311 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 XPO6Q96QU8 1125 aaKnown RBP18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 ALBP02768 609 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 NCKAP1LP55160 1127 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 SPP2Q13103 211 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 LSM7Q9UK45 103 aaKnown RBP18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 AP4S1Q9Y587 144 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 P4HA2O15460 535 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 PPP3CCP48454 512 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 RINLQ6ZS11 566 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 EEF2KO00418 725 aaKnown RBP18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 NUP62P37198 522 aaPredicted RBP18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 SPATA16Q9BXB7 569 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 MUTP22033 750 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 TWF1Q12792 350 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 FAM180AQ6UWF9 173 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 KDELC2Q7Z4H8 507 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 TRIM51Q9BSJ1 452 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 MUC3BQ9H195 1237 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 GGT7Q9UJ14 662 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 EIF2S1P05198 315 aaKnown RBP18.21■□□□□ 0.5
NOTCH3-201ENST00000263388 VHLP40337 213 aa18.21■□□□□ 0.5
NOTCH3-201ENST00000263388 SLC9A5Q14940 896 aa18.21■□□□□ 0.5
NOTCH3-201ENST00000263388 SNX17Q15036 470 aa18.21■□□□□ 0.5
NOTCH3-201ENST00000263388 CCDC126Q96EE4 140 aa18.21■□□□□ 0.5
NOTCH3-201ENST00000263388 FRMD8P1Q9BZ68 369 aaPredicted RBP18.21■□□□□ 0.5
NOTCH3-201ENST00000263388 RAD51CO43502 376 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 NMT1P30419 496 aaKnown RBP18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 NCALDP61601 193 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 ANGPT1Q15389 498 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 LDHDQ86WU2 507 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 TFB1MQ8WVM0 346 aaKnown RBP18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 EIF4E1BA6NMX2 242 aaKnown RBP18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 STK25O00506 426 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 FKBP9O95302 570 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 ACOT2P49753 483 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 TRIP10Q15642 601 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 FKBP9P1Q75LS8 142 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 WNK4Q96J92 1243 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 PAPOLBQ9NRJ5 636 aaKnown RBP18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 TK2O00142 265 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 KCNK10P57789 538 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 FOXO4P98177 505 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 ITIH4Q14624 930 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 MTFR1Q15390 333 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 KBTBD12Q3ZCT8 623 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 GALNT4Q8N4A0 578 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 RBBP8Q99708 897 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 ZDHHC9Q9Y397 364 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 KIZQ2M2Z5 673 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 C4orf33Q8N1A6 199 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 ANKRD7Q92527 254 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 IMPAD1Q9NX62 359 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 BRD2P25440 801 aaKnown RBP18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 USP38Q8NB14 1042 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 OR6J1Q8NGC5 347 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 BRD8Q9H0E9 1235 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 GYPCP04921 128 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 PLOD1Q02809 727 aaPredicted RBP18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 C12orf60Q5U649 245 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 OLFML2BQ68BL8 750 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 JAMLQ86YT9 394 aa18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 HNRNPLLQ8WVV9 542 aaKnown RBP18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 USP13Q92995 863 aaPredicted RBP18.2■□□□□ 0.5
NOTCH3-201ENST00000263388 FOXN1O15353 648 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 SV2CQ496J9 727 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 BBS7Q8IWZ6 715 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 NMRK1Q9NWW6 199 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 ACADSP16219 412 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 FMR1Q06787 632 aaKnown RBP eCLIP18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 ARHGEF7Q14155 803 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 FGD2Q7Z6J4 655 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 FLCNQ8NFG4 579 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 IGDCC4Q8TDY8 1250 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 KRCC1Q9NPI7 259 aaPredicted RBP18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 IL1RAPL1Q9NZN1 696 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 TADA2AO75478 443 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 PCSK1P29120 753 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 GUCY1A2P33402 732 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 MAP3K14Q99558 947 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 POLD4Q9HCU8 107 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 EXTL3O43909 919 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 FAR2Q96K12 515 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 TBL3Q12788 808 aaKnown RBP18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 BARGINQ6ZT62 677 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 MKNK1Q9BUB5 465 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 MTMR4Q9NYA4 1195 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 NAA30Q147X3 362 aaPredicted RBP18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 TFDP3Q5H9I0 405 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 PTRHD1Q6GMV3 140 aaKnown RBP18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 SNX31Q8N9S9 440 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 EPS8L2Q9H6S3 715 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 RFC5P40937 340 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 RFWD2Q8NHY2 731 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 ECSITQ9BQ95 431 aa18.19■□□□□ 0.5
NOTCH3-201ENST00000263388 TLK2Q86UE8 772 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 PDP2Q9P2J9 529 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 NFIBO00712 420 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms