RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 TBX2Q13207 712 aaPredicted RBP14.38□□□□□ -0.11
SGCA-201ENST00000262018 BMT2Q1RMZ1 405 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 SLC5A9Q2M3M2 681 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 RNF43Q68DV7 783 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 PADI6Q6TGC4 694 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.38□□□□□ -0.11
SGCA-201ENST00000262018 LRRC8AQ8IWT6 810 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 CCDC150Q8NCX0 1101 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 LNX1Q8TBB1 728 aaPredicted RBP14.38□□□□□ -0.11
SGCA-201ENST00000262018 HASPINQ8TF76 798 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 PIK3R5Q8WYR1 880 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 IRF7Q92985 503 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 TIPINQ9BVW5 301 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 KCTD10Q9H3F6 313 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 ZHX3Q9H4I2 956 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 ZNF334Q9HCZ1 680 aaPredicted RBP14.38□□□□□ -0.11
SGCA-201ENST00000262018 RBM12Q9NTZ6 932 aaKnown RBP14.38□□□□□ -0.11
SGCA-201ENST00000262018 TAB2Q9NYJ8 693 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 CACNG4Q9UBN1 327 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 SF3B1O75533 1304 aaKnown RBP eCLIP14.38□□□□□ -0.11
SGCA-201ENST00000262018 TAF4O00268 1085 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 TEX33O43247 280 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 EPN2O95208 641 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 FCARP24071 287 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 GDI1P31150 447 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 HOXC13P31276 330 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 MAPK7Q13164 816 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 EMC2Q15006 297 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 FAM171A1Q5VUB5 890 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 SPECC1LQ69YQ0 1117 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 PPP4R3CPQ6ZMV5 832 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 WDR5BQ86VZ2 330 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 ZC3H3Q8IXZ2 948 aaKnown RBP14.37□□□□□ -0.11
SGCA-201ENST00000262018 ZNF507Q8TCN5 953 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 GATA6Q92908 595 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 LOXL4Q96JB6 756 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 CNOT6LQ96LI5 555 aaKnown RBP14.37□□□□□ -0.11
SGCA-201ENST00000262018 PARVGQ9HBI0 331 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 ZFP14Q9HCL3 533 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 WASF3Q9UPY6 502 aa14.37□□□□□ -0.11
SGCA-201ENST00000262018 GCN1Q92616 2671 aaKnown RBP14.37□□□□□ -0.11
SGCA-201ENST00000262018 FLNBO75369 2602 aaKnown RBP14.37□□□□□ -0.11
SGCA-201ENST00000262018 UBE4BO95155 1302 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 ITIH6Q6UXX5 1313 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 N4BP3O15049 544 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 EIF3DO15371 548 aaKnown RBP eCLIP14.36□□□□□ -0.11
SGCA-201ENST00000262018 USO1O60763 962 aaKnown RBP14.36□□□□□ -0.11
SGCA-201ENST00000262018 ERLIN2O94905 339 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 PAPSS2O95340 614 aaPredicted RBP14.36□□□□□ -0.11
SGCA-201ENST00000262018 CASP5P51878 434 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 LRMPQ12912 555 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 LRRC32Q14392 662 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 HSP90AA2PQ14568 343 aaPredicted RBP14.36□□□□□ -0.11
SGCA-201ENST00000262018 ARID5BQ14865 1188 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 FAM78AQ5JUQ0 283 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 ARMCX5Q6P1M9 558 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 Q6ZS52 159 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 MAP4K3Q8IVH8 894 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 MYCT1Q8N699 235 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 MCPH1Q8NEM0 835 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 TCP11Q8WWU5 503 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 PRPF31Q8WWY3 499 aaKnown RBP14.36□□□□□ -0.11
SGCA-201ENST00000262018 CEP63Q96MT8 703 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 FIZ1Q96SL8 496 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 VPS16Q9H269 839 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 C2orf42Q9NWW7 574 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 GIT1Q9Y2X7 761 aa14.36□□□□□ -0.11
SGCA-201ENST00000262018 TDRD15B5MCY1 1934 aaKnown RBP14.36□□□□□ -0.11
SGCA-201ENST00000262018 SFI1A8K8P3 1242 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 LGALS16A8MUM7 142 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 HIP1RO75146 1068 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 MAPTP10636 758 aaKnown RBP14.35□□□□□ -0.11
SGCA-201ENST00000262018 AKAP5P24588 427 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 OR1D2P34982 312 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 FKBP3Q00688 224 aaKnown RBP14.35□□□□□ -0.11
SGCA-201ENST00000262018 KNOP1Q1ED39 458 aaKnown RBP14.35□□□□□ -0.11
SGCA-201ENST00000262018 EDRF1Q3B7T1 1238 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 CACNA2D4Q7Z3S7 1137 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 KBTBD6Q86V97 674 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 NELFCDQ8IXH7 590 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 DAW1Q8N136 415 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 TMEM143Q96AN5 459 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 CPB2Q96IY4 423 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 PAAF1Q9BRP4 392 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 TUBGCP2Q9BSJ2 902 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 SCNM1Q9BWG6 230 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 TRIM6Q9C030 488 aaPredicted RBP14.35□□□□□ -0.11
SGCA-201ENST00000262018 MRPL44Q9H9J2 332 aaKnown RBP14.35□□□□□ -0.11
SGCA-201ENST00000262018 KLK14Q9P0G3 267 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 PYCARDQ9ULZ3 195 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 TRAF3IP3Q9Y228 551 aa14.35□□□□□ -0.11
SGCA-201ENST00000262018 PDXKO00764 312 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 NRG2O14511 850 aaPredicted RBP14.34□□□□□ -0.11
SGCA-201ENST00000262018 PRPF6O94906 941 aaKnown RBP14.34□□□□□ -0.11
SGCA-201ENST00000262018 GCNT3O95395 438 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 TPM2P07951 284 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 PSMC3P17980 439 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 HOXD13P35453 343 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 CCZ1BP86790 482 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 CCZ1P86791 482 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms