RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 KATNAL2Q8IYT4 538 aa23.86■■□□□ 1.41
MCF2L-201ENST00000261963 KCNV2Q8TDN2 545 aa23.86■■□□□ 1.41
MCF2L-201ENST00000261963 PRPF31Q8WWY3 499 aaKnown RBP23.86■■□□□ 1.41
MCF2L-201ENST00000261963 MRPL47Q9HD33 250 aaKnown RBP23.86■■□□□ 1.41
MCF2L-201ENST00000261963 PNMA3Q9UL41 463 aa23.86■■□□□ 1.41
MCF2L-201ENST00000261963 RASGRF2O14827 1237 aa23.86■■□□□ 1.41
MCF2L-201ENST00000261963 CTCFP49711 727 aaPredicted RBP23.86■■□□□ 1.41
MCF2L-201ENST00000261963 ZPBP2Q6X784 338 aa23.86■■□□□ 1.41
MCF2L-201ENST00000261963 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.86■■□□□ 1.41
MCF2L-201ENST00000261963 MSCO60682 206 aa23.85■■□□□ 1.41
MCF2L-201ENST00000261963 ASS1P00966 412 aaKnown RBP23.85■■□□□ 1.41
MCF2L-201ENST00000261963 TCF7P36402 384 aaPredicted RBP23.85■■□□□ 1.41
MCF2L-201ENST00000261963 ATL2Q8NHH9 583 aa23.85■■□□□ 1.41
MCF2L-201ENST00000261963 ZNF606Q8WXB4 792 aa23.85■■□□□ 1.41
MCF2L-201ENST00000261963 FAM118BQ9BPY3 351 aa23.85■■□□□ 1.41
MCF2L-201ENST00000261963 TLR3O15455 904 aaKnown RBP23.85■■□□□ 1.41
MCF2L-201ENST00000261963 ITGA8P53708 1063 aa23.85■■□□□ 1.41
MCF2L-201ENST00000261963 MFSD5Q6N075 450 aa23.85■■□□□ 1.41
MCF2L-201ENST00000261963 SPATA21Q7Z572 469 aa23.85■■□□□ 1.41
MCF2L-201ENST00000261963 FITM2Q8N6M3 262 aa23.85■■□□□ 1.41
MCF2L-201ENST00000261963 GRK7Q8WTQ7 553 aa23.85■■□□□ 1.41
MCF2L-201ENST00000261963 R3HDMLQ9H3Y0 253 aa23.85■■□□□ 1.41
MCF2L-201ENST00000261963 USTQ9Y2C2 406 aa23.85■■□□□ 1.41
MCF2L-201ENST00000261963 SCINQ9Y6U3 715 aa23.85■■□□□ 1.41
MCF2L-201ENST00000261963 POTEJP0CG39 1038 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 RAB27AP51159 221 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 LRRC14Q15048 493 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 NUGGCQ68CJ6 796 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 ZBTB33Q86T24 672 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 RAB3IPQ96QF0 476 aaPredicted RBP23.84■■□□□ 1.41
MCF2L-201ENST00000261963 TSC22D3Q99576 134 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 OSBPL8Q9BZF1 889 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 TRIM33Q9UPN9 1127 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 ACSL3O95573 720 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 GAS8O95995 478 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 CD58P19256 250 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 MMP8P22894 467 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 CCDC38Q502W7 563 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 FAM160B1Q5W0V3 765 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 TRIM68Q6AZZ1 485 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 EEPD1Q7L9B9 569 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 FEZF2Q8TBJ5 459 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 MGARPQ8TDB4 240 aa23.84■■□□□ 1.41
MCF2L-201ENST00000261963 PAPOLAP51003 745 aaKnown RBP23.83■■□□□ 1.41
MCF2L-201ENST00000261963 RPL7AP62424 266 aaKnown RBP23.83■■□□□ 1.41
MCF2L-201ENST00000261963 CCNG2Q16589 344 aa23.83■■□□□ 1.41
MCF2L-201ENST00000261963 LY6KQ17RY6 165 aa23.83■■□□□ 1.41
MCF2L-201ENST00000261963 METTL7BQ6UX53 244 aa23.83■■□□□ 1.41
MCF2L-201ENST00000261963 WDR49Q8IV35 697 aa23.83■■□□□ 1.41
MCF2L-201ENST00000261963 EXD1Q8NHP7 514 aa23.83■■□□□ 1.41
MCF2L-201ENST00000261963 SEPT1Q8WYJ6 367 aa23.83■■□□□ 1.41
MCF2L-201ENST00000261963 ROPN1BQ9BZX4 212 aaPredicted RBP23.83■■□□□ 1.41
MCF2L-201ENST00000261963 MTMR12Q9C0I1 747 aa23.83■■□□□ 1.41
MCF2L-201ENST00000261963 SPATC1LQ9H0A9 340 aa23.83■■□□□ 1.41
MCF2L-201ENST00000261963 ROPN1Q9HAT0 212 aaPredicted RBP23.83■■□□□ 1.41
MCF2L-201ENST00000261963 PARVAQ9NVD7 372 aa23.83■■□□□ 1.41
MCF2L-201ENST00000261963 TOM1L1O75674 476 aa23.83■■□□□ 1.41
MCF2L-201ENST00000261963 ATF2P15336 505 aa23.83■■□□□ 1.41
MCF2L-201ENST00000261963 TCF4P15884 667 aa23.83■■□□□ 1.41
MCF2L-201ENST00000261963 GJC1P36383 396 aa23.83■■□□□ 1.41
MCF2L-201ENST00000261963 EXOC3L1Q86VI1 746 aa23.83■■□□□ 1.41
MCF2L-201ENST00000261963 NCAPG2Q86XI2 1143 aa23.83■■□□□ 1.41
MCF2L-201ENST00000261963 LRRC42Q9Y546 428 aa23.83■■□□□ 1.41
MCF2L-201ENST00000261963 DPPA5A6NC42 116 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 EIF4E1BA6NMX2 242 aaKnown RBP23.82■■□□□ 1.4
MCF2L-201ENST00000261963 ABLIM1O14639 778 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 CCNB1P14635 433 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 SKIV2L2P42285 1042 aaKnown RBP23.82■■□□□ 1.4
MCF2L-201ENST00000261963 MYL6P60660 151 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 LONRF1Q17RB8 773 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 FBF1Q8TES7 1133 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 PWWP2AQ96N64 755 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 ACO2Q99798 780 aaKnown RBP23.82■■□□□ 1.4
MCF2L-201ENST00000261963 MRPL4Q9BYD3 311 aaKnown RBP23.82■■□□□ 1.4
MCF2L-201ENST00000261963 DNAJC17Q9NVM6 304 aaKnown RBP23.82■■□□□ 1.4
MCF2L-201ENST00000261963 A0A0G2JMZ2 1700 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 LRRD1A4D1F6 860 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 SMIM24O75264 130 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 ADCY8P40145 1251 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 VPS41P49754 854 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 EFNA5P52803 228 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 ZNF252P-AS1Q0IIN9 211 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 GRM1Q13255 1194 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 ATP13A4Q4VNC1 1196 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 CWF19L1Q69YN2 538 aaKnown RBP23.82■■□□□ 1.4
MCF2L-201ENST00000261963 MFN1Q8IWA4 741 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 LMNTD2Q8IXW0 634 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 TRAIPQ9BWF2 469 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 IMPG2Q9BZV3 1241 aa23.82■■□□□ 1.4
MCF2L-201ENST00000261963 PAPOLBQ9NRJ5 636 aaKnown RBP23.82■■□□□ 1.4
MCF2L-201ENST00000261963 TCRBV5S1A1TA0A578 114 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 TMEM191CA6NGB0 347 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 ARIH2O95376 493 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 TMEM191BP0C7N4 346 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 GNAZP19086 355 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 SSR1P43307 286 aaKnown RBP23.81■■□□□ 1.4
MCF2L-201ENST00000261963 AP3M2P53677 418 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 PPP1R2P3Q6NXS1 205 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 TRIM50Q86XT4 487 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 TCHPQ9BT92 498 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms