RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 HSPH1Q92598 858 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 LRRC19Q9H756 370 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 STX18Q9P2W9 335 aaKnown RBP16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 COL1A1P02452 1464 aaPredicted RBP16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 CAPN8A6NHC0 703 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 PRR5-ARHGAP8B1AHC4 643 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 PEX2P28328 305 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 ARHGAP8P85298 464 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 ATP11CQ8NB49 1132 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 MTO1Q9Y2Z2 717 aaKnown RBP16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 FIS1Q9Y3D6 152 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 PROCP04070 461 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 FGFR1P11362 822 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 ADARP55265 1226 aaKnown RBP16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 CDK16Q00536 496 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 ZNF720Q7Z2F6 126 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 ETNPPLQ8TBG4 499 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 TUBB6Q9BUF5 446 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 MRPL1Q9BYD6 325 aaKnown RBP16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 KRT82Q9NSB4 513 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 ARHGEF38Q9NXL2 777 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 ADGRA3Q8IWK6 1321 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 AIM2O14862 343 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 AQP4P55087 323 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 PRAMEP78395 509 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 FMO1Q01740 532 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 FAAP100Q0VG06 881 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 PTK6Q13882 451 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 BRDTQ58F21 947 aaPredicted RBP16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 MFSD7Q6UXD7 560 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 SLF2Q8IX21 1173 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 ULK2Q8IYT8 1036 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 TTC16Q8NEE8 873 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 UVRAGQ9P2Y5 699 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 ZNF212Q9UDV6 495 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 NEMP1O14524 444 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 SEC24DO94855 1032 aaPredicted RBP16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 C6orf222P0C671 652 aaPredicted RBP16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 NFX1Q12986 1120 aaKnown RBP16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 SCYL2Q6P3W7 929 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 FAM71DQ8N9W8 422 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 OR6Y1Q8NGX8 325 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 LRGUKQ96M69 825 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 FAM210AQ96ND0 272 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 NACC1Q96RE7 527 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 ACSS2Q9NR19 701 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 ZMYM2Q9UBW7 1377 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 CASZ1Q86V15 1759 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 TBC1D12O60347 775 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 RAD17O75943 681 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 MAPK10P53779 464 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 ACVR2BQ13705 512 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 RALGPS1Q5JS13 557 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 INTS5Q6P9B9 1019 aaKnown RBP16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 UTS2BQ765I0 119 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 TTC25Q96NG3 672 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 MCEEQ96PE7 176 aa16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 LIN28AQ9H9Z2 209 aaKnown RBP16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 PIH1D1Q9NWS0 290 aaKnown RBP16.69■□□□□ 0.26
PRPF40B-201ENST00000261897 SOX11P35716 441 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 DLG1Q12959 904 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 PAOXQ6QHF9 649 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 HAUS6Q7Z4H7 955 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 TRIM42Q8IWZ5 723 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 TOPAZ1Q8N9V7 1692 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 PPP2R3CQ969Q6 453 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 ACCSQ96QU6 501 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 MIS12Q9H081 205 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 XPO7Q9UIA9 1087 aaKnown RBP16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 GPR75-ASB3A0A0A6YYF3 556 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 WDR64B1ANS9 1081 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 SORBS2O94875 1100 aaKnown RBP16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 RAG1P15918 1043 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 MX2P20592 715 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 CCR3P51677 355 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 OCRLQ01968 901 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 TMEM62Q0P6H9 643 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 MOGSQ13724 837 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 CDO1Q16878 200 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 SEZ6Q53EL9 994 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 SLC44A4Q53GD3 710 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 PTAR1Q7Z6K3 402 aaPredicted RBP16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 ASB3Q9Y575 518 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 SPEF2Q9C093 1822 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 IQANK1A0A1B0GTG1 560 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 BPIFB4P59827 614 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 SHKBP1Q8TBC3 707 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 NAT14Q8WUY8 206 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 AGBL1Q96MI9 1066 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 KREMEN1Q96MU8 473 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 SENP1Q9P0U3 644 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 HEY1Q9Y5J3 304 aa16.68■□□□□ 0.26
PRPF40B-201ENST00000261897 FSCN2O14926 492 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 AVILO75366 819 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 PMLP29590 882 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 CCDC15Q0P6D6 951 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 ORC2Q13416 577 aaPredicted RBP16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 FAM192AQ9GZU8 254 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 SAR1AQ9NR31 198 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms