RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 O00370 1275 aa23.72■■□□□ 1.39
SIX3-201ENST00000260653 CALB1P05937 261 aa23.72■■□□□ 1.39
SIX3-201ENST00000260653 PRMT2P55345 433 aa23.72■■□□□ 1.39
SIX3-201ENST00000260653 SOWAHAQ2M3V2 549 aa23.72■■□□□ 1.39
SIX3-201ENST00000260653 CYP4A22Q5TCH4 519 aa23.72■■□□□ 1.39
SIX3-201ENST00000260653 ERICH1Q86X53 443 aa23.72■■□□□ 1.39
SIX3-201ENST00000260653 TTC39CQ8N584 583 aa23.72■■□□□ 1.39
SIX3-201ENST00000260653 UBL4BQ8N7F7 174 aa23.72■■□□□ 1.39
SIX3-201ENST00000260653 MRPL47Q9HD33 250 aaKnown RBP23.72■■□□□ 1.39
SIX3-201ENST00000260653 SCINQ9Y6U3 715 aa23.72■■□□□ 1.39
SIX3-201ENST00000260653 MYO1FO00160 1098 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 MICAL2O94851 1124 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 VDRP11473 427 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 CYP3A5P20815 502 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 PTPN20Q4JDL3 420 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 SGO2Q562F6 1265 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 GSTCDQ8NEC7 633 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 RNPC3Q96LT9 517 aaKnown RBP23.71■■□□□ 1.39
SIX3-201ENST00000260653 GAD1Q99259 594 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 WNT8AQ9H1J5 351 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 STARD7Q9NQZ5 370 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 PARVAQ9NVD7 372 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 ZNF446Q9NWS9 450 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 TJP2Q9UDY2 1190 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 PEX5P50542 639 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 C12orf29Q8N999 325 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 ZNF560Q96MR9 790 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 AP1M1Q9BXS5 423 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 CACNG4Q9UBN1 327 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 TMEM59LQ9UK28 342 aa23.71■■□□□ 1.39
SIX3-201ENST00000260653 KPNA7A9QM74 516 aa23.7■■□□□ 1.38
SIX3-201ENST00000260653 M0QYV0 167 aa23.7■■□□□ 1.38
SIX3-201ENST00000260653 CTNNA1P35221 906 aaKnown RBP23.7■■□□□ 1.38
SIX3-201ENST00000260653 AADACL2Q6P093 401 aa23.7■■□□□ 1.38
SIX3-201ENST00000260653 HDAC7Q8WUI4 952 aa23.7■■□□□ 1.38
SIX3-201ENST00000260653 TCRBV5S1A1TA0A578 114 aa23.7■■□□□ 1.38
SIX3-201ENST00000260653 FGGP02679 453 aa23.7■■□□□ 1.38
SIX3-201ENST00000260653 IBSPP21815 317 aaPredicted RBP23.7■■□□□ 1.38
SIX3-201ENST00000260653 RPL7AP62424 266 aaKnown RBP23.7■■□□□ 1.38
SIX3-201ENST00000260653 FAM26DQ5JW98 314 aa23.7■■□□□ 1.38
SIX3-201ENST00000260653 DAB2IPQ5VWQ8 1189 aa23.7■■□□□ 1.38
SIX3-201ENST00000260653 HACE1Q8IYU2 909 aa23.7■■□□□ 1.38
SIX3-201ENST00000260653 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.7■■□□□ 1.38
SIX3-201ENST00000260653 HCRTO43612 131 aa23.69■■□□□ 1.38
SIX3-201ENST00000260653 ZMYND10O75800 440 aa23.69■■□□□ 1.38
SIX3-201ENST00000260653 SEC31AO94979 1220 aaKnown RBP23.69■■□□□ 1.38
SIX3-201ENST00000260653 TAF6P49848 677 aa23.69■■□□□ 1.38
SIX3-201ENST00000260653 CNGA2Q16280 664 aa23.69■■□□□ 1.38
SIX3-201ENST00000260653 AGMOQ6ZNB7 445 aa23.69■■□□□ 1.38
SIX3-201ENST00000260653 ACOT1Q86TX2 421 aa23.69■■□□□ 1.38
SIX3-201ENST00000260653 CPXM1Q96SM3 734 aa23.69■■□□□ 1.38
SIX3-201ENST00000260653 HINFPQ9BQA5 517 aa23.69■■□□□ 1.38
SIX3-201ENST00000260653 CCDC151A5D8V7 595 aa23.69■■□□□ 1.38
SIX3-201ENST00000260653 MYCP01106 439 aaPredicted RBP23.69■■□□□ 1.38
SIX3-201ENST00000260653 CKBP12277 381 aa23.69■■□□□ 1.38
SIX3-201ENST00000260653 PNPLA4P41247 253 aa23.69■■□□□ 1.38
SIX3-201ENST00000260653 OR6B3Q8NGW1 331 aa23.69■■□□□ 1.38
SIX3-201ENST00000260653 FEZF2Q8TBJ5 459 aa23.69■■□□□ 1.38
SIX3-201ENST00000260653 TARSL2A2RTX5 802 aaKnown RBP23.68■■□□□ 1.38
SIX3-201ENST00000260653 CCDC66A2RUB6 948 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 ARL5CA6NH57 179 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 PROSCO94903 275 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 IGFBP6P24592 240 aaPredicted RBP23.68■■□□□ 1.38
SIX3-201ENST00000260653 CTNNA2P26232 953 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 DSC3Q14574 896 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 C8orf74Q6P047 294 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 DNAJC24Q6P3W2 148 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 SLC43A3Q8NBI5 491 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 RNF169Q8NCN4 708 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 UBA3Q8TBC4 463 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 KBTBD7Q8WVZ9 684 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 MCEEQ96PE7 176 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 KRT12Q99456 494 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 MIOSQ9NXC5 875 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 GDAP2Q9NXN4 497 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 TSPAN16Q9UKR8 245 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 TTC7AQ9ULT0 858 aaPredicted RBP23.68■■□□□ 1.38
SIX3-201ENST00000260653 PCDHA3Q9Y5H8 950 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 LRPAP1P30533 357 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 GPD2P43304 727 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 LILRA4P59901 499 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 SLC7A5Q01650 507 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 BRD3Q15059 726 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 CCDC70Q6NSX1 233 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 CC2D1AQ6P1N0 951 aaPredicted RBP23.68■■□□□ 1.38
SIX3-201ENST00000260653 WDR93Q6P2C0 686 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 ADAM2Q99965 735 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 UNC93B1Q9H1C4 597 aa23.68■■□□□ 1.38
SIX3-201ENST00000260653 DMGDHQ9UI17 866 aaKnown RBP23.68■■□□□ 1.38
SIX3-201ENST00000260653 KRIT1O00522 736 aa23.67■■□□□ 1.38
SIX3-201ENST00000260653 FGFR1P11362 822 aa23.67■■□□□ 1.38
SIX3-201ENST00000260653 SV2CQ496J9 727 aa23.67■■□□□ 1.38
SIX3-201ENST00000260653 TMCO3Q6UWJ1 677 aa23.67■■□□□ 1.38
SIX3-201ENST00000260653 MTERF4Q7Z6M4 381 aaKnown RBP23.67■■□□□ 1.38
SIX3-201ENST00000260653 MRPL10Q7Z7H8 261 aaKnown RBP23.67■■□□□ 1.38
SIX3-201ENST00000260653 KLHL7Q8IXQ5 586 aa23.67■■□□□ 1.38
SIX3-201ENST00000260653 DPEP3Q9H4B8 488 aa23.67■■□□□ 1.38
SIX3-201ENST00000260653 FAM49BQ9NUQ9 324 aa23.67■■□□□ 1.38
SIX3-201ENST00000260653 KIAA1257Q9ULG3 409 aa23.67■■□□□ 1.38
SIX3-201ENST00000260653 L1RE1Q9UN81 338 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms