RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 OR10T2Q8NGX3 314 aa17.96■□□□□ 0.47
SDCBP-201ENST00000260130 SPATA18Q8TC71 538 aa17.96■□□□□ 0.47
SDCBP-201ENST00000260130 SUSD6Q92537 303 aa17.96■□□□□ 0.47
SDCBP-201ENST00000260130 TSC1Q92574 1164 aa17.96■□□□□ 0.47
SDCBP-201ENST00000260130 TMEM8AQ9HCN3 771 aa17.96■□□□□ 0.47
SDCBP-201ENST00000260130 DACH1Q9UI36 760 aa17.96■□□□□ 0.47
SDCBP-201ENST00000260130 BECN2A8MW95 431 aa17.96■□□□□ 0.46
SDCBP-201ENST00000260130 ELF1P32519 619 aa17.96■□□□□ 0.46
SDCBP-201ENST00000260130 GPR17Q13304 367 aa17.96■□□□□ 0.46
SDCBP-201ENST00000260130 ZNF699Q32M78 642 aa17.96■□□□□ 0.46
SDCBP-201ENST00000260130 CCDC40Q4G0X9 1142 aa17.96■□□□□ 0.46
SDCBP-201ENST00000260130 DCAF17Q5H9S7 520 aaPredicted RBP17.96■□□□□ 0.46
SDCBP-201ENST00000260130 TCERG1LQ5VWI1 586 aa17.96■□□□□ 0.46
SDCBP-201ENST00000260130 RTL10Q7L3V2 364 aa17.96■□□□□ 0.46
SDCBP-201ENST00000260130 GPR149Q86SP6 731 aa17.96■□□□□ 0.46
SDCBP-201ENST00000260130 ADGRF2Q8IZF7 708 aa17.96■□□□□ 0.46
SDCBP-201ENST00000260130 MED15Q96RN5 788 aa17.96■□□□□ 0.46
SDCBP-201ENST00000260130 TMEM209Q96SK2 561 aa17.96■□□□□ 0.46
SDCBP-201ENST00000260130 AFF4Q9UHB7 1163 aaKnown RBP17.96■□□□□ 0.46
SDCBP-201ENST00000260130 MAFFQ9ULX9 164 aa17.96■□□□□ 0.46
SDCBP-201ENST00000260130 PLXNA3P51805 1871 aa17.95■□□□□ 0.46
SDCBP-201ENST00000260130 GABRDO14764 452 aa17.95■□□□□ 0.46
SDCBP-201ENST00000260130 FGFR1OPO95684 399 aaKnown RBP17.95■□□□□ 0.46
SDCBP-201ENST00000260130 GNA14O95837 355 aa17.95■□□□□ 0.46
SDCBP-201ENST00000260130 C8AP07357 584 aa17.95■□□□□ 0.46
SDCBP-201ENST00000260130 LHX1P48742 406 aa17.95■□□□□ 0.46
SDCBP-201ENST00000260130 TNNC1P63316 161 aa17.95■□□□□ 0.46
SDCBP-201ENST00000260130 ATAT1Q5SQI0 421 aa17.95■□□□□ 0.46
SDCBP-201ENST00000260130 KRT39Q6A163 491 aa17.95■□□□□ 0.46
SDCBP-201ENST00000260130 RNF19BQ6ZMZ0 732 aa17.95■□□□□ 0.46
SDCBP-201ENST00000260130 CCDC149Q6ZUS6 474 aa17.95■□□□□ 0.46
SDCBP-201ENST00000260130 C11orf57Q6ZUT1 292 aaPredicted RBP17.95■□□□□ 0.46
SDCBP-201ENST00000260130 NAT10Q9H0A0 1025 aaKnown RBP17.95■□□□□ 0.46
SDCBP-201ENST00000260130 DDX43Q9NXZ2 648 aaKnown RBP17.95■□□□□ 0.46
SDCBP-201ENST00000260130 NXF1Q9UBU9 619 aaKnown RBP17.95■□□□□ 0.46
SDCBP-201ENST00000260130 C5orf42Q9H799 3197 aa17.95■□□□□ 0.46
SDCBP-201ENST00000260130 SMTNL1A8MU46 457 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 PAPLNO95428 1278 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 HLA-DRAP01903 254 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 WEE2P0C1S8 567 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 PIK3CAP42336 1068 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 ADCY1Q08828 1119 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 CBX2Q14781 532 aaPredicted RBP17.94■□□□□ 0.46
SDCBP-201ENST00000260130 ZNF667Q5HYK9 610 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 PPM1LQ5SGD2 360 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 CYP26C1Q6V0L0 522 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 TCEAL8Q8IYN2 117 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 SLC7A14Q8TBB6 771 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 FEZF2Q8TBJ5 459 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 TAF4BQ92750 862 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 RIPOR3Q96MK2 946 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 ACBD6Q9BR61 282 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 ZCWPW1Q9H0M4 648 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 CYP4F11Q9HBI6 524 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 CDH22Q9UJ99 828 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 CLSTN1O94985 981 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 HNRNPA1P09651 372 aaKnown RBP eCLIP17.94■□□□□ 0.46
SDCBP-201ENST00000260130 FAM163BP0C2L3 166 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 ERCC5P28715 1186 aaPredicted RBP17.94■□□□□ 0.46
SDCBP-201ENST00000260130 MTHFRP42898 656 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 MYL7Q01449 175 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 TAS1R2Q8TE23 839 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 KBTBD7Q8WVZ9 684 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 SLC35C1Q96A29 364 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 NECTIN4Q96NY8 510 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 RHOBTB2Q9BYZ6 727 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 PRKD2Q9BZL6 878 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 PAXBP1Q9Y5B6 917 aa17.94■□□□□ 0.46
SDCBP-201ENST00000260130 PRRG1O14668 218 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 TACC1O75410 805 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 SEC24AO95486 1093 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 ASS1P00966 412 aaKnown RBP17.93■□□□□ 0.46
SDCBP-201ENST00000260130 HOXA9P31269 272 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 MXI1P50539 228 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 SYCP1Q15431 976 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 CT47A1Q5JQC4 288 aaPredicted RBP17.93■□□□□ 0.46
SDCBP-201ENST00000260130 OSTM1Q86WC4 334 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 ZNF707Q96C28 371 aaPredicted RBP17.93■□□□□ 0.46
SDCBP-201ENST00000260130 PGLYRP2Q96PD5 576 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 POLIQ9UNA4 740 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 TNNT1P13805 278 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 WARSP23381 471 aaKnown RBP17.93■□□□□ 0.46
SDCBP-201ENST00000260130 MARSP56192 900 aaKnown RBP17.93■□□□□ 0.46
SDCBP-201ENST00000260130 TSPY1Q01534 308 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 SLC39A12Q504Y0 691 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 LRRTM3Q86VH5 581 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 DCP1BQ8IZD4 617 aaKnown RBP17.93■□□□□ 0.46
SDCBP-201ENST00000260130 ADAMTS19Q8TE59 1207 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 ANKRD7Q92527 254 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 SMG7Q92540 1137 aaKnown RBP17.93■□□□□ 0.46
SDCBP-201ENST00000260130 ELMO3Q96BJ8 720 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 C16orf45Q96MC5 204 aaPredicted RBP17.93■□□□□ 0.46
SDCBP-201ENST00000260130 ARID3AQ99856 593 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 MRPL45Q9BRJ2 306 aaKnown RBP17.93■□□□□ 0.46
SDCBP-201ENST00000260130 IMPG2Q9BZV3 1241 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 PRKAG3Q9UGI9 489 aa17.93■□□□□ 0.46
SDCBP-201ENST00000260130 VNN2O95498 520 aa17.92■□□□□ 0.46
SDCBP-201ENST00000260130 P4HA1P13674 534 aa17.92■□□□□ 0.46
SDCBP-201ENST00000260130 PCSK1P29120 753 aa17.92■□□□□ 0.46
SDCBP-201ENST00000260130 SMARCB1Q12824 385 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms