RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 CFAP52Q8N1V2 620 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 PDPRQ8NCN5 879 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 SIMC1Q8NDZ2 872 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 STAG1Q8WVM7 1258 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 SLC9A6Q92581 669 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 PTCD3Q96EY7 689 aaKnown RBP6.25□□□□□ -1.41
TRA2B-201ENST00000259043 CASS4Q9NQ75 786 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 FOXJ2Q9P0K8 574 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 LUC7L2Q9Y383 392 aaKnown RBP6.25□□□□□ -1.41
TRA2B-201ENST00000259043 A2ML1A8K2U0 1454 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 STRCP1A6NGW2 1772 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 ANXA1P04083 346 aa6.24□□□□□ -1.41
TRA2B-201ENST00000259043 CDK4P11802 303 aa6.24□□□□□ -1.41
TRA2B-201ENST00000259043 LPOP22079 712 aaPredicted RBP6.24□□□□□ -1.41
TRA2B-201ENST00000259043 GATA3P23771 443 aa6.24□□□□□ -1.41
TRA2B-201ENST00000259043 PRDX5P30044 214 aa6.24□□□□□ -1.41
TRA2B-201ENST00000259043 NEK2P51955 445 aa6.24□□□□□ -1.41
TRA2B-201ENST00000259043 POU6F2P78424 691 aaPredicted RBP6.24□□□□□ -1.41
TRA2B-201ENST00000259043 ZNF169Q14929 603 aaPredicted RBP6.24□□□□□ -1.41
TRA2B-201ENST00000259043 KIAA0895LQ68EN5 471 aa6.24□□□□□ -1.41
TRA2B-201ENST00000259043 USP45Q70EL2 814 aa6.24□□□□□ -1.41
TRA2B-201ENST00000259043 PDSS2Q86YH6 399 aa6.24□□□□□ -1.41
TRA2B-201ENST00000259043 FAM98AQ8NCA5 519 aaKnown RBP6.24□□□□□ -1.41
TRA2B-201ENST00000259043 C3orf20Q8ND61 904 aa6.24□□□□□ -1.41
TRA2B-201ENST00000259043 NSUN7Q8NE18 718 aaKnown RBP6.24□□□□□ -1.41
TRA2B-201ENST00000259043 AIFM2Q9BRQ8 373 aa6.24□□□□□ -1.41
TRA2B-201ENST00000259043 TYW1Q9NV66 732 aaKnown RBP6.24□□□□□ -1.41
TRA2B-201ENST00000259043 SETD1AO15047 1707 aaKnown RBP6.24□□□□□ -1.41
TRA2B-201ENST00000259043 ARHGAP35Q9NRY4 1499 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 TRGV11A0A075B6L2 103 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 MGST3O14880 152 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 SRGNP10124 158 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 CYP2C19P33261 490 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 HK3P52790 923 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 SIM1P81133 766 aaPredicted RBP6.23□□□□□ -1.41
TRA2B-201ENST00000259043 MC2RQ01718 297 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 NOGQ13253 232 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 DYRK1AQ13627 763 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 CLNKQ7Z7G1 428 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 CATIPQ7Z7H3 387 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 ZBTB46Q86UZ6 589 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 SLC17A8Q8NDX2 589 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 HSPBAP1Q96EW2 488 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 PDLIM2Q96JY6 352 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 IMPG2Q9BZV3 1241 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 R3HDMLQ9H3Y0 253 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 MAN1C1Q9NR34 630 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 RLIMQ9NVW2 624 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 POLHQ9Y253 713 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 NEU2Q9Y3R4 380 aa6.23□□□□□ -1.41
TRA2B-201ENST00000259043 INO80Q9ULG1 1556 aaPredicted RBP6.23□□□□□ -1.41
TRA2B-201ENST00000259043 LRRC7Q96NW7 1537 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 SYCP2Q9BX26 1530 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 CCDC195A0A1B0GUA6 201 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 KRTAP29-1A8MX34 341 aaPredicted RBP6.22□□□□□ -1.41
TRA2B-201ENST00000259043 SLC16A6O15403 523 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 PROM1O43490 865 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 FTH1P19P0C7X4 201 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 CXCR5P32302 372 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 RPS7P62081 194 aaKnown RBP6.22□□□□□ -1.41
TRA2B-201ENST00000259043 ZNF844Q08AG5 666 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 SF3B3Q15393 1217 aaKnown RBP6.22□□□□□ -1.41
TRA2B-201ENST00000259043 CD300EQ496F6 205 aaPredicted RBP6.22□□□□□ -1.41
TRA2B-201ENST00000259043 ZNF362Q5T0B9 420 aaPredicted RBP6.22□□□□□ -1.41
TRA2B-201ENST00000259043 VWA1Q6PCB0 445 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 RD3Q7Z3Z2 195 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 POC1BQ8TC44 478 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 SCAMP4Q969E2 229 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 TMEM125Q96AQ2 219 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 C1orf43Q9BWL3 253 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 GTPBP4Q9BZE4 634 aaKnown RBP6.22□□□□□ -1.41
TRA2B-201ENST00000259043 GPR35Q9HC97 309 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 INTS13Q9NVM9 706 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 MRPS18AQ9NVS2 196 aaKnown RBP6.22□□□□□ -1.41
TRA2B-201ENST00000259043 PCDHA3Q9Y5H8 950 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 IQGAP1P46940 1657 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 ADGBQ8N7X0 1667 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 CLIP1P30622 1438 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 MED14O60244 1454 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 A2MP01023 1474 aa6.22□□□□□ -1.41
TRA2B-201ENST00000259043 ATP7AQ04656 1500 aa6.21□□□□□ -1.42
TRA2B-201ENST00000259043 E7ENX8 843 aa6.21□□□□□ -1.42
TRA2B-201ENST00000259043 ABLIM3O94929 683 aa6.21□□□□□ -1.42
TRA2B-201ENST00000259043 GJB1P08034 283 aa6.21□□□□□ -1.42
TRA2B-201ENST00000259043 PTH2RP49190 550 aa6.21□□□□□ -1.42
TRA2B-201ENST00000259043 ANXA11P50995 505 aaKnown RBP6.21□□□□□ -1.42
TRA2B-201ENST00000259043 MAP2K6P52564 334 aa6.21□□□□□ -1.42
TRA2B-201ENST00000259043 TAP2Q03519 686 aa6.21□□□□□ -1.42
TRA2B-201ENST00000259043 ADGRG5Q8IZF4 528 aa6.21□□□□□ -1.42
TRA2B-201ENST00000259043 RGMAQ96B86 450 aa6.21□□□□□ -1.42
TRA2B-201ENST00000259043 HOOK2Q96ED9 719 aa6.21□□□□□ -1.42
TRA2B-201ENST00000259043 NUP88Q99567 741 aaPredicted RBP6.21□□□□□ -1.42
TRA2B-201ENST00000259043 ETAA1Q9NY74 926 aa6.21□□□□□ -1.42
TRA2B-201ENST00000259043 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.21□□□□□ -1.42
TRA2B-201ENST00000259043 FMN1Q68DA7 1419 aa6.21□□□□□ -1.42
TRA2B-201ENST00000259043 DEPDC5O75140 1603 aa6.21□□□□□ -1.42
TRA2B-201ENST00000259043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.2□□□□□ -1.42
TRA2B-201ENST00000259043 DTNBO60941 627 aa6.2□□□□□ -1.42
TRA2B-201ENST00000259043 ARIH2O95376 493 aa6.2□□□□□ -1.42
TRA2B-201ENST00000259043 MATN4O95460 622 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms