RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 ATICP31939 592 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 CACNB2Q08289 660 aaPredicted RBP9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 MAMLD1Q13495 774 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 TRADDQ15628 312 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 CLUL1Q15846 466 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 FAM187BQ17R55 369 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 KCNT1Q5JUK3 1230 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 CD302Q8IX05 232 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 APPL2Q8NEU8 664 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 ZNF560Q96MR9 790 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 TWNKQ96RR1 684 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 GAD1Q99259 594 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 CACNG4Q9UBN1 327 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 TSPAN16Q9UKR8 245 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 RAB21Q9UL25 225 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 BARX2Q9UMQ3 279 aaPredicted RBP9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 ST3GAL5Q9UNP4 418 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 ZNF148Q9UQR1 794 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 C2CD2Q9Y426 696 aa9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 TIMM13Q9Y5L4 95 aaPredicted RBP9.21□□□□□ -0.94
CALCOCO2-201ENST00000258947 TLDC2A0PJX2 215 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 ABLIM1O14639 778 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 MLH1P40692 756 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 CRYBB1P53674 252 aaPredicted RBP9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 MRPS6P82932 125 aaKnown RBP9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 HASPINQ8TF76 798 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 RIN2Q8WYP3 895 aaPredicted RBP9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 MAK16Q9BXY0 300 aaKnown RBP9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 XYLT2Q9H1B5 865 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 NR2E1Q9Y466 385 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 IPPQ9Y573 584 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 LOC285556D6RIA3 1793 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 CASTOR2A6NHX0 329 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 F8VP50 259 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 FAM189A1O60320 539 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 MICAL2O94851 1124 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 GAS8O95995 478 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 CD4P01730 458 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 RALAP11233 206 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 LCP1P13796 627 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 ACAT1P24752 427 aaKnown RBP9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 SLC1A1P43005 524 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 LMAN1P49257 510 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 TAF6P49848 677 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 C1QBPQ07021 282 aaKnown RBP9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 ENPEPQ07075 957 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 SLFN11Q7Z7L1 901 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 DNAJC17Q9NVM6 304 aaKnown RBP9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 MTRF1LQ9UGC7 380 aaKnown RBP9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 L1RE1Q9UN81 338 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 ATP8A1Q9Y2Q0 1164 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 SMIM28A0A1B0GU29 152 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 KPNA6O60684 536 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 PROSCO94903 275 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 ECEL1O95672 775 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 POMCP01189 267 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 CTGFP29279 349 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 HOXA11P31270 313 aaPredicted RBP9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 CD52P31358 61 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 GNL1P36915 607 aaPredicted RBP9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 ADCY8P40145 1251 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 PPP2R5EQ16537 467 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 ATP13A4Q4VNC1 1196 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 GDF6Q6KF10 455 aaPredicted RBP9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 SLC13A5Q86YT5 568 aaPredicted RBP9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 CASKIN2Q8WXE0 1202 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 CALR3Q96L12 384 aaKnown RBP9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 ZMAT2Q96NC0 199 aaKnown RBP9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 MRPL45Q9BRJ2 306 aaKnown RBP9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 ELOVL4Q9GZR5 314 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 CXCL16Q9H2A7 254 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 ADAMTS10Q9H324 1103 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 RNF186Q9NXI6 227 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 TJP2Q9UDY2 1190 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 TRPV2Q9Y5S1 764 aa9.2□□□□□ -0.94
CALCOCO2-201ENST00000258947 DDX3YO15523 660 aaKnown RBP9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 GPR32O75388 356 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 TOMM70O94826 608 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 LSM8O95777 96 aaKnown RBP9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 VDRP11473 427 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 KRT10P13645 584 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 HSPA6P17066 643 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 RAD23BP54727 409 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 RNASELQ05823 741 aaKnown RBP9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 KCTD16Q68DU8 428 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 MON1BQ7L1V2 547 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 PCSK9Q8NBP7 692 aaKnown RBP9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 KCTD6Q8NC69 237 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 TRPV1Q8NER1 839 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 SDCBP2Q9H190 292 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 CYP3A43Q9HB55 503 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 TRMT13Q9NUP7 481 aaKnown RBP9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 PASKQ96RG2 1323 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 KPNA7A9QM74 516 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 ATP8B1O43520 1251 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 CYP1A1P04798 512 aaPredicted RBP9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 PDGFRAP16234 1089 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 MMP8P22894 467 aa9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 CTNNA1P35221 906 aaKnown RBP9.19□□□□□ -0.94
CALCOCO2-201ENST00000258947 ITIH3Q06033 890 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms