RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 HOXA9P31269 272 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 PPP1R2P41236 205 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 CDR1P51861 262 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 MYL6P60660 151 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 BIRC3Q13489 604 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 STIM1Q13586 685 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 WDR72Q3MJ13 1102 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 TDRD10Q5VZ19 366 aaKnown RBP9.15□□□□□ -0.94
TMEM258-201ENST00000257262 INTS8Q75QN2 995 aaKnown RBP9.15□□□□□ -0.94
TMEM258-201ENST00000257262 RTL10Q7L3V2 364 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 DPH6Q7L8W6 267 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 GRASPQ7Z6J2 395 aaPredicted RBP9.15□□□□□ -0.94
TMEM258-201ENST00000257262 TCEAL8Q8IYN2 117 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 PDCL2Q8N4E4 241 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 TOP6BLQ8N6T0 577 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 OR10T2Q8NGX3 314 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 DHTKD1Q96HY7 919 aaPredicted RBP9.15□□□□□ -0.94
TMEM258-201ENST00000257262 GBP4Q96PP9 640 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 MMS19Q96T76 1030 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 TSG101Q99816 390 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 RHOBTB2Q9BYZ6 727 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 ZCWPW1Q9H0M4 648 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 CRISPLD1Q9H336 500 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 WDR6Q9NNW5 1121 aaKnown RBP9.15□□□□□ -0.94
TMEM258-201ENST00000257262 DDX43Q9NXZ2 648 aaKnown RBP9.15□□□□□ -0.94
TMEM258-201ENST00000257262 POLIQ9UNA4 740 aa9.15□□□□□ -0.94
TMEM258-201ENST00000257262 BRWD1Q9NSI6 2320 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 MTMR11A4FU01 709 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 C2CD4DB7Z1M9 353 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 HCRTO43612 131 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 XYLBO75191 536 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 STAU1O95793 577 aaKnown RBP9.14□□□□□ -0.95
TMEM258-201ENST00000257262 LRG1P02750 347 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 TRIM49P0CI25 452 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 TRIM49CP0CI26 452 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 KRT13P13646 458 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 PTPN2P17706 415 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 ACAT1P24752 427 aaKnown RBP9.14□□□□□ -0.95
TMEM258-201ENST00000257262 ATICP31939 592 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 MCCD1P59942 119 aaPredicted RBP9.14□□□□□ -0.95
TMEM258-201ENST00000257262 NTHL1P78549 312 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 FKBP3Q00688 224 aaKnown RBP9.14□□□□□ -0.95
TMEM258-201ENST00000257262 MYL7Q01449 175 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 LRRC63Q05C16 580 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 PPP3CAQ08209 521 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 DUSP4Q13115 394 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 ZACNQ401N2 412 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 SLC39A12Q504Y0 691 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 KLHL10Q6JEL2 608 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 SV2AQ7L0J3 742 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 LIMS2Q7Z4I7 341 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 LRRTM3Q86VH5 581 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 OSTM1Q86WC4 334 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 RNF135Q8IUD6 432 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 ZC3H3Q8IXZ2 948 aaKnown RBP9.14□□□□□ -0.95
TMEM258-201ENST00000257262 ADGRF2Q8IZF7 708 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 TMEM86AQ8N2M4 240 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 TRIML1Q8N9V2 468 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 KBTBD7Q8WVZ9 684 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 NELFBQ8WX92 580 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 ELMO3Q96BJ8 720 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 DUSP9Q99956 384 aaKnown RBP9.14□□□□□ -0.95
TMEM258-201ENST00000257262 ACBD6Q9BR61 282 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 MKNK1Q9BUB5 465 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 XYLT2Q9H1B5 865 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 CLSTN2Q9H4D0 955 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 MMRN2Q9H8L6 949 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 HCFC1R1Q9NWW0 138 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 DNMT3BQ9UBC3 853 aaKnown RBP9.14□□□□□ -0.95
TMEM258-201ENST00000257262 MAFFQ9ULX9 164 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 SLC27A5Q9Y2P5 690 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 NR2E1Q9Y466 385 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 INSL5Q9Y5Q6 135 aa9.14□□□□□ -0.95
TMEM258-201ENST00000257262 CLUHO75153 1309 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 GABRDO14764 452 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 N4BP1O75113 896 aaKnown RBP9.13□□□□□ -0.95
TMEM258-201ENST00000257262 PDGFRBP09619 1106 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 EPB41P11171 864 aaKnown RBP9.13□□□□□ -0.95
TMEM258-201ENST00000257262 LMO2P25791 158 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 GBP2P32456 591 aaPredicted RBP9.13□□□□□ -0.95
TMEM258-201ENST00000257262 PLA2G5P39877 138 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 GCLMP48507 274 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 LHX1P48742 406 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 STX17P56962 302 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 TNNC1P63316 161 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 ENPEPQ07075 957 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 TWF1Q12792 350 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 NCOA4Q13772 614 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 SGSM1Q2NKQ1 1148 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 DCP1BQ8IZD4 617 aaKnown RBP9.13□□□□□ -0.95
TMEM258-201ENST00000257262 TTC9BQ8N6N2 239 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 ATAD1Q8NBU5 361 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 GPT2Q8TD30 523 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 SYAP1Q96A49 352 aaPredicted RBP9.13□□□□□ -0.95
TMEM258-201ENST00000257262 ACSF2Q96CM8 615 aaPredicted RBP9.13□□□□□ -0.95
TMEM258-201ENST00000257262 MRPL45Q9BRJ2 306 aaKnown RBP9.13□□□□□ -0.95
TMEM258-201ENST00000257262 NUP62CLQ9H1M0 184 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 EPHX3Q9H6B9 360 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 TMLHEQ9NVH6 421 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 CEP72Q9P209 647 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms