RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 KLHL11Q9NVR0 708 aa11.93□□□□□ -0.5
PDE6B-201ENST00000255622 PARP2Q9UGN5 583 aa11.93□□□□□ -0.5
PDE6B-201ENST00000255622 GGA2Q9UJY4 613 aa11.93□□□□□ -0.5
PDE6B-201ENST00000255622 SSX2IPQ9Y2D8 614 aa11.93□□□□□ -0.5
PDE6B-201ENST00000255622 KIAA1217Q5T5P2 1943 aa11.93□□□□□ -0.5
PDE6B-201ENST00000255622 MYPNQ86TC9 1320 aa11.93□□□□□ -0.5
PDE6B-201ENST00000255622 NLRP11P59045 1033 aaKnown RBP11.92□□□□□ -0.5
PDE6B-201ENST00000255622 SEZ6Q53EL9 994 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 ANKS1BQ7Z6G8 1248 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 TMC2Q8TDI7 906 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 CCDC68Q9H2F9 335 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 SYNCQ9H7C4 482 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 C1orf112Q9NSG2 853 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 FSCN2O14926 492 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 TNNI1P19237 187 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 PRKCEQ02156 737 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 SLMAPQ14BN4 828 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 MTERF2Q49AM1 385 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 C6orf118Q5T5N4 469 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 TDRD10Q5VZ19 366 aaKnown RBP11.92□□□□□ -0.5
PDE6B-201ENST00000255622 GRAMD4Q6IC98 578 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 MAMSTRQ6ZN01 415 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 ZNF365Q70YC5 407 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 VSIG10LQ86VR7 867 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 CCDC125Q86Z20 511 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 DCLK2Q8N568 766 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 C12orf50Q8NA57 414 aaPredicted RBP11.92□□□□□ -0.5
PDE6B-201ENST00000255622 MTMR14Q8NCE2 650 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 AGBL3Q8NEM8 1001 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 TMEM143Q96AN5 459 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 ZBTB45Q96K62 511 aaPredicted RBP11.92□□□□□ -0.5
PDE6B-201ENST00000255622 HAPLN2Q9GZV7 340 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 POLR3FQ9H1D9 316 aaPredicted RBP11.92□□□□□ -0.5
PDE6B-201ENST00000255622 CNOT7Q9UIV1 285 aaKnown RBP11.92□□□□□ -0.5
PDE6B-201ENST00000255622 ZBED4O75132 1171 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 PLOD1Q02809 727 aaPredicted RBP11.92□□□□□ -0.5
PDE6B-201ENST00000255622 SNRNP48Q6IEG0 339 aaKnown RBP11.92□□□□□ -0.5
PDE6B-201ENST00000255622 EXOC3L1Q86VI1 746 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 ERICH1Q86X53 443 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 C11orf70Q9BRQ4 267 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 NTPCRQ9BSD7 190 aaKnown RBP11.92□□□□□ -0.5
PDE6B-201ENST00000255622 GGT7Q9UJ14 662 aa11.92□□□□□ -0.5
PDE6B-201ENST00000255622 AGTP01019 485 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 VIMP08670 466 aaKnown RBP11.91□□□□□ -0.5
PDE6B-201ENST00000255622 RALAP11233 206 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 DSG3P32926 999 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 SCTRP47872 440 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 ITGA8P53708 1063 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 KYNUQ16719 465 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 UMODL1Q5DID0 1318 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 ARID2Q68CP9 1835 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 SAMD7Q7Z3H4 446 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 AGAP11Q8TF27 550 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 CCT6BQ92526 530 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 TRPV5Q9NQA5 729 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 DLGAP2Q9P1A6 1054 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 USTQ9Y2C2 406 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 EFR3BQ9Y2G0 817 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 COL11A1P12107 1806 aaPredicted RBP11.91□□□□□ -0.5
PDE6B-201ENST00000255622 CD58P19256 250 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 IVDP26440 423 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 CCND2P30279 289 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 RFC5P40937 340 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 PIK3CAP42336 1068 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 TAS2R40P59535 323 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 ELF3P78545 371 aaPredicted RBP11.91□□□□□ -0.5
PDE6B-201ENST00000255622 GCNT1Q02742 428 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 OLFML2BQ68BL8 750 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 DPY19L2Q6NUT2 758 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 TMEM154Q6P9G4 183 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 CENPTQ96BT3 561 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 MAELQ96JY0 434 aaKnown RBP11.91□□□□□ -0.5
PDE6B-201ENST00000255622 ELAC2Q9BQ52 826 aaKnown RBP11.91□□□□□ -0.5
PDE6B-201ENST00000255622 APOBEC3GQ9HC16 384 aaKnown RBP11.91□□□□□ -0.5
PDE6B-201ENST00000255622 PFDN4Q9NQP4 134 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 CYP26B1Q9NR63 512 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 SH3GLB1Q9Y371 365 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 CD2APQ9Y5K6 639 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 ZNF541Q9H0D2 1346 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 TRIM64CA6NLI5 447 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 MGRN1O60291 552 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 PEX10O60683 326 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 HLA-DRAP01903 254 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 LIG4P49917 911 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 MCCD1P59942 119 aaPredicted RBP11.91□□□□□ -0.5
PDE6B-201ENST00000255622 CNGA2Q16280 664 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 ZNF568Q3ZCX4 644 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 NBPF12Q5TAG4 269 aaPredicted RBP11.91□□□□□ -0.5
PDE6B-201ENST00000255622 TBC1D1Q86TI0 1168 aaPredicted RBP11.91□□□□□ -0.5
PDE6B-201ENST00000255622 SLC17A8Q8NDX2 589 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 NDEL1Q9GZM8 345 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 JPH1Q9HDC5 661 aaPredicted RBP11.91□□□□□ -0.5
PDE6B-201ENST00000255622 ANKFY1Q9P2R3 1169 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 TBK1Q9UHD2 729 aa11.91□□□□□ -0.5
PDE6B-201ENST00000255622 SPTLC1O15269 473 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 VNN1O95497 513 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 EDN1P05305 212 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 TROVE2P10155 538 aaKnown RBP eCLIP11.9□□□□□ -0.5
PDE6B-201ENST00000255622 HSPA8P11142 646 aaKnown RBP11.9□□□□□ -0.5
PDE6B-201ENST00000255622 TCF4P15884 667 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms