RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 PHF13Q86YI8 300 aaPredicted RBP16.59■□□□□ 0.25
RFX1-201ENST00000254325 SRRM1Q8IYB3 904 aaKnown RBP16.59■□□□□ 0.25
RFX1-201ENST00000254325 EMC1Q8N766 993 aa16.59■□□□□ 0.25
RFX1-201ENST00000254325 CCDC197Q8NCU1 140 aa16.59■□□□□ 0.25
RFX1-201ENST00000254325 GDAP1Q8TB36 358 aa16.59■□□□□ 0.25
RFX1-201ENST00000254325 PCYT2Q99447 389 aa16.59■□□□□ 0.25
RFX1-201ENST00000254325 FERMT1Q9BQL6 677 aa16.59■□□□□ 0.25
RFX1-201ENST00000254325 AP5M1Q9H0R1 490 aa16.59■□□□□ 0.25
RFX1-201ENST00000254325 MROH7Q68CQ1 1323 aa16.58■□□□□ 0.25
RFX1-201ENST00000254325 F8VP50 259 aa16.58■□□□□ 0.25
RFX1-201ENST00000254325 GRAP2O75791 330 aa16.58■□□□□ 0.25
RFX1-201ENST00000254325 PIGRP01833 764 aa16.58■□□□□ 0.25
RFX1-201ENST00000254325 SHBGP04278 402 aa16.58■□□□□ 0.25
RFX1-201ENST00000254325 PHBP35232 272 aa16.58■□□□□ 0.25
RFX1-201ENST00000254325 ATP11AP98196 1134 aa16.58■□□□□ 0.25
RFX1-201ENST00000254325 LRRC14Q15048 493 aa16.58■□□□□ 0.25
RFX1-201ENST00000254325 ZKSCAN8Q15776 578 aaPredicted RBP16.58■□□□□ 0.25
RFX1-201ENST00000254325 CCNG2Q16589 344 aa16.58■□□□□ 0.25
RFX1-201ENST00000254325 KYAT1Q16773 422 aa16.58■□□□□ 0.25
RFX1-201ENST00000254325 TTC13Q8NBP0 860 aa16.58■□□□□ 0.25
RFX1-201ENST00000254325 ENPEPQ07075 957 aa16.58■□□□□ 0.24
RFX1-201ENST00000254325 KIZQ2M2Z5 673 aa16.58■□□□□ 0.24
RFX1-201ENST00000254325 BBS9Q3SYG4 887 aa16.58■□□□□ 0.24
RFX1-201ENST00000254325 IQCGQ9H095 443 aaKnown RBP16.58■□□□□ 0.24
RFX1-201ENST00000254325 SNX25Q9H3E2 840 aa16.58■□□□□ 0.24
RFX1-201ENST00000254325 LRRC19Q9H756 370 aa16.58■□□□□ 0.24
RFX1-201ENST00000254325 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.58■□□□□ 0.24
RFX1-201ENST00000254325 MFSD7Q6UXD7 560 aa16.58■□□□□ 0.24
RFX1-201ENST00000254325 CRELD2Q6UXH1 353 aaPredicted RBP16.58■□□□□ 0.24
RFX1-201ENST00000254325 MON1BQ7L1V2 547 aa16.58■□□□□ 0.24
RFX1-201ENST00000254325 DDX1Q92499 740 aaKnown RBP16.58■□□□□ 0.24
RFX1-201ENST00000254325 CST8O60676 142 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 CFHP08603 1231 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 NFICP08651 508 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 FAM47CQ5HY64 1035 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 HHATQ5VTY9 493 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 JADE1Q6IE81 842 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 BEST2Q8NFU1 509 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 FAM149B1Q96BN6 582 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 PTPN11Q06124 597 aaPredicted RBP16.57■□□□□ 0.24
RFX1-201ENST00000254325 MYCBPAPQ8TBZ2 947 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 RNPEPQ9H4A4 650 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 DPP3Q9NY33 737 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 SYNJ2BP-COX16A0A087WUM0 186 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 M0QZ92 97 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 XPOTO43592 962 aaKnown RBP16.57■□□□□ 0.24
RFX1-201ENST00000254325 MSCO60682 206 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 NPTXRO95502 500 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 MYL3P08590 195 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 CDH6P55285 790 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 WNT7BP56706 349 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 PPP6R3Q5H9R7 873 aaPredicted RBP16.57■□□□□ 0.24
RFX1-201ENST00000254325 CHMP6Q96FZ7 201 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 XPO6Q96QU8 1125 aaKnown RBP16.57■□□□□ 0.24
RFX1-201ENST00000254325 FAM129AQ9BZQ8 928 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 COX16Q9P0S2 106 aa16.57■□□□□ 0.24
RFX1-201ENST00000254325 RIPK2O43353 540 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 CYP1A1P04798 512 aaPredicted RBP16.56■□□□□ 0.24
RFX1-201ENST00000254325 BRAFP15056 766 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 PDGFRAP16234 1089 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 DENND1BQ6P3S1 775 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 SPOCD1Q6ZMY3 1216 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 KATNAL2Q8IYT4 538 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 ZBED8Q8IZ13 594 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 PYROXD1Q8WU10 500 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 DDX23Q9BUQ8 820 aaKnown RBP16.56■□□□□ 0.24
RFX1-201ENST00000254325 FAM49BQ9NUQ9 324 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 TNFSF13BQ9Y275 285 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 FAM107AO95990 144 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 MCF2P10911 925 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 MCL1Q07820 350 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 DGKDQ16760 1214 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 FBXO41Q8TF61 875 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 ELAC2Q9BQ52 826 aaKnown RBP16.56■□□□□ 0.24
RFX1-201ENST00000254325 NT5C1AQ9BXI3 368 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 STYXL1Q9Y6J8 313 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 TTLL13PA6NNM8 815 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 RPS6KA5O75582 802 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 PTGIRP43119 386 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 PDIA2Q13087 525 aaKnown RBP16.56■□□□□ 0.24
RFX1-201ENST00000254325 CPSF3Q9UKF6 684 aaKnown RBP16.56■□□□□ 0.24
RFX1-201ENST00000254325 NEU2Q9Y3R4 380 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 A6NJR5 290 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 EIF4BP23588 611 aaKnown RBP16.56■□□□□ 0.24
RFX1-201ENST00000254325 GTF2A2P52657 109 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 TFDP3Q5H9I0 405 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 CTAGE3PQ8IX95 158 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 VTA1Q9NP79 307 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 HEY1Q9Y5J3 304 aa16.56■□□□□ 0.24
RFX1-201ENST00000254325 A8MXQ7 604 aa16.55■□□□□ 0.24
RFX1-201ENST00000254325 RASA4BC9J798 803 aa16.55■□□□□ 0.24
RFX1-201ENST00000254325 RASA4O43374 803 aa16.55■□□□□ 0.24
RFX1-201ENST00000254325 MMP8P22894 467 aa16.55■□□□□ 0.24
RFX1-201ENST00000254325 SDC4P31431 198 aa16.55■□□□□ 0.24
RFX1-201ENST00000254325 MAGEA9P43362 315 aa16.55■□□□□ 0.24
RFX1-201ENST00000254325 YWHAGP61981 247 aaKnown RBP eCLIP16.55■□□□□ 0.24
RFX1-201ENST00000254325 GLRA4Q5JXX5 417 aa16.55■□□□□ 0.24
RFX1-201ENST00000254325 ZC3H18Q86VM9 953 aaKnown RBP16.55■□□□□ 0.24
RFX1-201ENST00000254325 TTC39CQ8N584 583 aa16.55■□□□□ 0.24
RFX1-201ENST00000254325 RAPGEF5Q92565 580 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms