RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 DUPD1Q68J44 220 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 MPZL3Q6UWV2 235 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 TSHZ1Q6ZSZ6 1077 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 JAMLQ86YT9 394 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 FAM126BQ8IXS8 530 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 NME8Q8N427 588 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 PRELID2Q8N945 189 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 MAIP1Q8WWC4 291 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 ARL8AQ96BM9 186 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 PKNOX2Q96KN3 472 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 FMO2Q99518 471 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 OSBPL7Q9BZF2 842 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 NEUROG2Q9H2A3 272 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 ADAM22Q9P0K1 906 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 PARP2Q9UGN5 583 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 SCINQ9Y6U3 715 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 MROH7Q68CQ1 1323 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 HMGB1P1B2RPK0 211 aaPredicted RBP12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 ACKR2O00590 384 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 ASS1P00966 412 aaKnown RBP12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 TNNC2P02585 160 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 HNRNPH2P55795 449 aaKnown RBP12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 MRPS6P82932 125 aaKnown RBP12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 POU5F1BQ06416 359 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 CYP1B1Q16678 543 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 TRIM60Q495X7 471 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 SPDYCQ5MJ68 293 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 CEP85LQ5SZL2 805 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 ATF7IP2Q5U623 682 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 CCDC137Q6PK04 289 aaKnown RBP12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 MON1BQ7L1V2 547 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 ZNF410Q86VK4 478 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 PHF13Q86YI8 300 aaPredicted RBP12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 IFNLR1Q8IU57 520 aaPredicted RBP12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 PASD1Q8IV76 773 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 C18orf8Q96DM3 657 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 CAPS2Q9BXY5 557 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 NFKBIZQ9BYH8 718 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 GCOM2Q9BZD3 368 aaPredicted RBP12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 MTMR12Q9C0I1 747 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 FZD8Q9H461 694 aa12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 CPSF3Q9UKF6 684 aaKnown RBP12.1□□□□□ -0.47
CLUHP3-201ENST00000254109 FAM189A1O60320 539 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 TMEM191BP0C7N4 346 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 MYZAPP0CAP1 466 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 DARSP14868 501 aaKnown RBP12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 PTGIRP43119 386 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 NOMO3P69849 1222 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 TFAMQ00059 246 aaKnown RBP12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 C1QBPQ07021 282 aaKnown RBP12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 DHX9Q08211 1270 aaKnown RBP12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 MGAT3Q09327 533 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 SNX17Q15036 470 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 AMHR2Q16671 573 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 ZNF568Q3ZCX4 644 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 ZNF618Q5T7W0 954 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 SMYD5Q6GMV2 418 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 TMC3Q7Z5M5 1100 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 RSPH3Q86UC2 560 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 CDR2LQ86X02 465 aaPredicted RBP12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 CCDC105Q8IYK2 499 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 ANKLE1Q8NAG6 615 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 CPB2Q96IY4 423 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 C11orf70Q9BRQ4 267 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 C11orf49Q9H6J7 331 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 TRPV2Q9Y5S1 764 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 UMODL1Q5DID0 1318 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 SHOX2O60902 331 aaPredicted RBP12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 PROSCO94903 275 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 CST3P01034 146 aaPredicted RBP12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 CD4P01730 458 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 RARAP10276 462 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 CKBP12277 381 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 PROZP22891 400 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 EIF4BP23588 611 aaKnown RBP12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 COILP38432 576 aaPredicted RBP12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 FNTAP49354 379 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 CRYBB1P53674 252 aaPredicted RBP12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 YWHAEP62258 255 aaKnown RBP12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 SKOR1P84550 965 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 KCTD16Q68DU8 428 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 PHLDB2Q86SQ0 1253 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 RPAINQ86UA6 219 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 C12orf50Q8NA57 414 aaPredicted RBP12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 ANKRD36BP1Q96IX9 119 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 ATP6V1G3Q96LB4 118 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 NIF3L1Q9GZT8 377 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 PARVAQ9NVD7 372 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 MTRF1LQ9UGC7 380 aaKnown RBP12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 SNX24Q9Y343 169 aa12.09□□□□□ -0.47
CLUHP3-201ENST00000254109 M0QZ92 97 aa12.08□□□□□ -0.48
CLUHP3-201ENST00000254109 FSCN2O14926 492 aa12.08□□□□□ -0.48
CLUHP3-201ENST00000254109 PPFIA2O75334 1257 aa12.08□□□□□ -0.48
CLUHP3-201ENST00000254109 IL18RAPO95256 599 aa12.08□□□□□ -0.48
CLUHP3-201ENST00000254109 ECEL1O95672 775 aa12.08□□□□□ -0.48
CLUHP3-201ENST00000254109 LSM8O95777 96 aaKnown RBP12.08□□□□□ -0.48
CLUHP3-201ENST00000254109 FLT3P36888 993 aa12.08□□□□□ -0.48
CLUHP3-201ENST00000254109 ZNF132P52740 706 aa12.08□□□□□ -0.48
CLUHP3-201ENST00000254109 MYL6P60660 151 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms