RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 XRCC4Q13426 336 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 GRM2Q14416 872 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 TARBP2Q15633 366 aaKnown RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 WHAMMP3Q1A5X7 153 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 PRAMEF19Q5SWL8 479 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 LARP1BQ659C4 914 aaKnown RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 ANO7Q6IWH7 933 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 SPATS2Q86XZ4 545 aaKnown RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 TRIM22Q8IYM9 498 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 VPS37AQ8NEZ2 397 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 RDM1Q8NG50 284 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 DEPTORQ8TB45 409 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 CPLX3Q8WVH0 158 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 CSRNP2Q9H175 543 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 VIPAS39Q9H9C1 493 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 VAT1LQ9HCJ6 419 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 SMYD2Q9NRG4 433 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 SEL1LQ9UBV2 794 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 HESX1Q9UBX0 185 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 TRHDEQ9UKU6 1024 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 PRELID1Q9Y255 219 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 GOLGA6L7A0A1B0GV03 622 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 A0A1W2PQ45 241 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 A0A1W2PQY0 241 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 HTR3EA5X5Y0 456 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 TDP2O95551 362 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 CCNYL3P0C7X3 344 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 NCAM1P13591 858 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 ZFXP17010 805 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 EIF2AK2P19525 551 aaKnown RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 LPOP22079 712 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 PDE6CP51160 858 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 SEC24CP53992 1094 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 WNT7BP56706 349 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 UBXN2AP68543 259 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 ATP2C1P98194 919 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 FAM160A1Q05DH4 1040 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 STIM1Q13586 685 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 PWP1Q13610 501 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 GPNMBQ14956 572 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 INAVAQ3KP66 663 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 MARCH8Q5T0T0 291 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 FAM173BQ6P4H8 233 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 XKR5Q6UX68 686 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 SEPT14Q6ZU15 432 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 NEK10Q6ZWH5 1172 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 TLK2Q86UE8 772 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 LSRQ86X29 649 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 DIS3L2Q8IYB7 885 aaKnown RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 GSPT2Q8IYD1 628 aaKnown RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 NOA1Q8NC60 698 aaKnown RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 LSM14AQ8ND56 463 aaKnown RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 TBCKQ8TEA7 893 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 DIS3LQ8TF46 1054 aaKnown RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 LRRC15Q8TF66 581 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 LEO1Q8WVC0 666 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 EXOC2Q96KP1 924 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 BPIFA3Q9BQP9 254 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 NAA15Q9BXJ9 866 aaKnown RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 CCDC68Q9H2F9 335 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 CLSTN2Q9H4D0 955 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 NPHS2Q9NP85 383 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 PDLIM7Q9NR12 457 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 KCNH7Q9NS40 1196 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 R3HDM2Q9Y2K5 976 aaKnown RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 IGKV6-21A0A0C4DH24 114 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 GOLGA6L9A6NEM1 432 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 BTBD18B2RXH4 712 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 NRG2O14511 850 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 SART1O43290 800 aaKnown RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 TACC1O75410 805 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 TMCC1O94876 653 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 CFBP00751 764 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 PF4P02776 101 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 NUDT7P0C024 238 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 POU3F2P20265 443 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 CAPN3P20807 821 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 MGAT3Q09327 533 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 IKQ13123 557 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 DRP2Q13474 957 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 NONOQ15233 471 aaKnown RBP eCLIP3.88□□□□□ -1.79
UFM1-201ENST00000239878 SEPT7Q16181 437 aaKnown RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 PTPN21Q16825 1174 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 LY6KQ17RY6 165 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 SH3PXD2AQ5TCZ1 1133 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 ARHGEF16Q5VV41 709 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 KCTD16Q68DU8 428 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 TRIM68Q6AZZ1 485 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 PLBD1Q6P4A8 553 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 NSMFQ6X4W1 530 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 PLPPR4Q7Z2D5 763 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 DPP9Q86TI2 863 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 OSTM1Q86WC4 334 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 SLC9A9Q8IVB4 645 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 FAM126BQ8IXS8 530 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 CCDC155Q8N6L0 562 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 GABPB2Q8TAK5 448 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 KIFAP3Q92845 792 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 SPATA17Q96L03 361 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 TOX2Q96NM4 488 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms