RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 SKIP12755 728 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 KRT5P13647 590 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 KCNE1P15382 129 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 GATMP50440 423 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 GALCP54803 685 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 WNT7BP56706 349 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 FMO1Q01740 532 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 PAK2Q13177 524 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 CAMK1Q14012 370 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 COL19A1Q14993 1142 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 STILQ15468 1287 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 C11orf63Q6NUN7 778 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 ZNF572Q7Z3I7 529 aaPredicted RBP14.06□□□□□ -0.16
SLIRP-201ENST00000238688 MTERF4Q7Z6M4 381 aaKnown RBP14.06□□□□□ -0.16
SLIRP-201ENST00000238688 SLFN11Q7Z7L1 901 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 NOP9Q86U38 636 aaKnown RBP14.06□□□□□ -0.16
SLIRP-201ENST00000238688 FAM228AQ86W67 206 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 NPAS4Q8IUM7 802 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 BEST2Q8NFU1 509 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 RUBCNQ92622 972 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 PPP1R16BQ96T49 567 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 UBQLN1Q9UMX0 589 aaKnown RBP14.06□□□□□ -0.16
SLIRP-201ENST00000238688 CEP83Q9Y592 693 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 NUB1Q9Y5A7 615 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 MRPL42Q9Y6G3 142 aaKnown RBP14.06□□□□□ -0.16
SLIRP-201ENST00000238688 GRID2IPA4D2P6 1211 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 C9IYK1 514 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 RB1P06400 928 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 NAP1L1P55209 391 aaKnown RBP14.05□□□□□ -0.16
SLIRP-201ENST00000238688 MYL6P60660 151 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 CENPCQ03188 943 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 NFX1Q12986 1120 aaKnown RBP14.05□□□□□ -0.16
SLIRP-201ENST00000238688 DSC3Q14574 896 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 CLEC16AQ2KHT3 1053 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 AAK1Q2M2I8 961 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 LMBRD2Q68DH5 695 aaPredicted RBP14.05□□□□□ -0.16
SLIRP-201ENST00000238688 JADE1Q6IE81 842 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 ACAD10Q6JQN1 1059 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 ALKAL1Q6UXT8 129 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 SLC47A2Q86VL8 602 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 CMTR2Q8IYT2 770 aaKnown RBP14.05□□□□□ -0.16
SLIRP-201ENST00000238688 C1orf127Q8N9H9 656 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 RBBP8NLQ8NC74 664 aaPredicted RBP14.05□□□□□ -0.16
SLIRP-201ENST00000238688 UBXN4Q92575 508 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 RABGGTAQ92696 567 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 GOLGA1Q92805 767 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 KAT5Q92993 513 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 FAM212AQ96EL1 285 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 CPB2Q96IY4 423 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 ZNF560Q96MR9 790 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 UBE2ZQ9H832 354 aaPredicted RBP14.05□□□□□ -0.16
SLIRP-201ENST00000238688 APOBEC3GQ9HC16 384 aaKnown RBP14.05□□□□□ -0.16
SLIRP-201ENST00000238688 SLC38A7Q9NVC3 462 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 TRIM10Q9UDY6 481 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 PCDHGC3Q9UN70 934 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 ST3GAL5Q9UNP4 418 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 PIN4Q9Y237 131 aaKnown RBP14.05□□□□□ -0.16
SLIRP-201ENST00000238688 GINS2Q9Y248 185 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 PCDHB4Q9Y5E5 795 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 CAPN6Q9Y6Q1 641 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 DUSP10Q9Y6W6 482 aa14.05□□□□□ -0.16
SLIRP-201ENST00000238688 A0A0U1RQJ8 604 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 CTAGE15A4D2H0 777 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 MIF4GDA9UHW6 222 aaKnown RBP14.04□□□□□ -0.16
SLIRP-201ENST00000238688 TADA3O75528 432 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 RPS6KA5O75582 802 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 MOCS3O95396 460 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 NPTXRO95502 500 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 FTLP02792 175 aaPredicted RBP14.04□□□□□ -0.16
SLIRP-201ENST00000238688 CYP1A1P04798 512 aaPredicted RBP14.04□□□□□ -0.16
SLIRP-201ENST00000238688 CYP1A2P05177 515 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 NFICP08651 508 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 CTAGE8P0CG41 777 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 CHRNB2P17787 502 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 GNA15P30679 374 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 CTNNB1P35222 781 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 FAM189BP81408 668 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 C1QBPQ07021 282 aaKnown RBP14.04□□□□□ -0.16
SLIRP-201ENST00000238688 INCA1Q0VD86 236 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 BTG3Q14201 252 aaPredicted RBP14.04□□□□□ -0.16
SLIRP-201ENST00000238688 ZBTB6Q15916 424 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 TCEAL5Q5H9L2 206 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 MEI1Q5TIA1 1274 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 TMEM270Q6UE05 265 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 CTAGE6Q86UF2 777 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 CTAGE4Q8IX94 777 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 CEP120Q8N960 986 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 LRRC57Q8N9N7 239 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 MSANTD4Q8NCY6 345 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 TPCN2Q8NHX9 752 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.04□□□□□ -0.16
SLIRP-201ENST00000238688 CXorf38Q8TB03 319 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 ATRIPQ8WXE1 791 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 RSPH1Q8WYR4 309 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 PBKQ96KB5 322 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 PI4K2AQ9BTU6 479 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 MIS12Q9H081 205 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 UBN1Q9NPG3 1134 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 RGS18Q9NS28 235 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 CISHQ9NSE2 258 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms