RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 CRIPAKQ8N1N5 446 aa19.76■□□□□ 0.75
SNX17-201ENST00000233575 ZNF653Q96CK0 615 aa19.76■□□□□ 0.75
SNX17-201ENST00000233575 NAPGQ99747 312 aaPredicted RBP19.76■□□□□ 0.75
SNX17-201ENST00000233575 C11orf70Q9BRQ4 267 aa19.76■□□□□ 0.75
SNX17-201ENST00000233575 FAM124BQ9H5Z6 455 aaPredicted RBP19.76■□□□□ 0.75
SNX17-201ENST00000233575 ELAC1Q9H777 363 aaKnown RBP19.76■□□□□ 0.75
SNX17-201ENST00000233575 PCDHB7Q9Y5E2 793 aa19.76■□□□□ 0.75
SNX17-201ENST00000233575 TIMM13Q9Y5L4 95 aaPredicted RBP19.76■□□□□ 0.75
SNX17-201ENST00000233575 CTAGE9A4FU28 777 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 O00370 1275 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 URI1O94763 535 aaPredicted RBP19.75■□□□□ 0.75
SNX17-201ENST00000233575 GNL1P36915 607 aaPredicted RBP19.75■□□□□ 0.75
SNX17-201ENST00000233575 BRCC3P46736 316 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 PTPROQ16827 1216 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 TIGD5Q53EQ6 642 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.75■□□□□ 0.754e-9■■■■■ 37.8
SNX17-201ENST00000233575 MON1BQ7L1V2 547 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 TTC39CQ8N584 583 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 TOP6BLQ8N6T0 577 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 TPCN2Q8NHX9 752 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 FAM49BQ9NUQ9 324 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 HCSTQ9UBK5 93 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 CYTH4Q9UIA0 394 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 PCDHGC5Q9Y5F6 944 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 MICAL2O94851 1124 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 PARNO95453 639 aaKnown RBP19.75■□□□□ 0.75
SNX17-201ENST00000233575 VDRP11473 427 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 DSC1Q08554 894 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 CCDC142Q17RM4 750 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 SGO2Q562F6 1265 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 SMYD5Q6GMV2 418 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 MMS22LQ6ZRQ5 1243 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 ALS2CR12Q96Q35 445 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 DNAJB4Q9UDY4 337 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.75■□□□□ 0.75
SNX17-201ENST00000233575 STXBP5LQ9Y2K9 1186 aa19.75■□□□□ 0.75
SNX17-201ENST00000233575 NCK2O43639 380 aa19.74■□□□□ 0.75
SNX17-201ENST00000233575 KIF4AO95239 1232 aa19.74■□□□□ 0.75
SNX17-201ENST00000233575 RRM1P23921 792 aa19.74■□□□□ 0.75
SNX17-201ENST00000233575 AARSP49588 968 aaKnown RBP eCLIP19.74■□□□□ 0.75
SNX17-201ENST00000233575 CDR1P51861 262 aa19.74■□□□□ 0.75
SNX17-201ENST00000233575 PTP4A2Q12974 167 aa19.74■□□□□ 0.75
SNX17-201ENST00000233575 PPP1R26Q5T8A7 1209 aaPredicted RBP19.74■□□□□ 0.75
SNX17-201ENST00000233575 UNC93AQ86WB7 457 aa19.74■□□□□ 0.75
SNX17-201ENST00000233575 URGCPQ8TCY9 931 aa19.74■□□□□ 0.75
SNX17-201ENST00000233575 SNX25Q9H3E2 840 aa19.74■□□□□ 0.75
SNX17-201ENST00000233575 CTTNBP2NLQ9P2B4 639 aa19.74■□□□□ 0.75
SNX17-201ENST00000233575 CNOT8Q9UFF9 292 aaKnown RBP19.74■□□□□ 0.75
SNX17-201ENST00000233575 GTF3C4Q9UKN8 822 aa19.74■□□□□ 0.75
SNX17-201ENST00000233575 RIOK3O14730 519 aaKnown RBP19.73■□□□□ 0.75
SNX17-201ENST00000233575 MED7O43513 233 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 FTCDO95954 541 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 CYP1A2P05177 515 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 ACAT1P24752 427 aaKnown RBP19.73■□□□□ 0.75
SNX17-201ENST00000233575 CDH5P33151 784 aaPredicted RBP19.73■□□□□ 0.75
SNX17-201ENST00000233575 DSTYKQ6XUX3 929 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 PHF13Q86YI8 300 aaPredicted RBP19.73■□□□□ 0.75
SNX17-201ENST00000233575 COLGALT2Q8IYK4 626 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 LRRC57Q8N9N7 239 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 UBA3Q8TBC4 463 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 DDX27Q96GQ7 796 aaKnown RBP19.73■□□□□ 0.75
SNX17-201ENST00000233575 CASD1Q96PB1 797 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 ADAM22Q9P0K1 906 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 TJP2Q9UDY2 1190 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 TSPAN16Q9UKR8 245 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 LRFN2Q9ULH4 789 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 M0QYV0 167 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 ATP2C2O75185 946 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 LSM8O95777 96 aaKnown RBP19.73■□□□□ 0.75
SNX17-201ENST00000233575 TIMP1P01033 207 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 CSF2RAP15509 400 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 WARSP23381 471 aaKnown RBP19.73■□□□□ 0.75
SNX17-201ENST00000233575 PSMC1P62191 440 aaKnown RBP19.73■□□□□ 0.75
SNX17-201ENST00000233575 RNASELQ05823 741 aaKnown RBP19.73■□□□□ 0.75
SNX17-201ENST00000233575 CNGA2Q16280 664 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 TMEM35BQ8NCS4 154 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 NUP85Q9BW27 656 aa19.73■□□□□ 0.75
SNX17-201ENST00000233575 PACSIN2Q9UNF0 486 aaPredicted RBP19.73■□□□□ 0.75
SNX17-201ENST00000233575 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.73■□□□□ 0.75
SNX17-201ENST00000233575 TSC2P49815 1807 aa19.72■□□□□ 0.75
SNX17-201ENST00000233575 BUB1BO60566 1050 aaPredicted RBP19.72■□□□□ 0.75
SNX17-201ENST00000233575 MMP8P22894 467 aa19.72■□□□□ 0.75
SNX17-201ENST00000233575 AMPD2Q01433 879 aa19.72■□□□□ 0.75
SNX17-201ENST00000233575 KIAA0319Q5VV43 1072 aa19.72■□□□□ 0.75
SNX17-201ENST00000233575 UBE2Q1Q7Z7E8 422 aa19.72■□□□□ 0.75
SNX17-201ENST00000233575 ABI1Q8IZP0 508 aa19.72■□□□□ 0.75
SNX17-201ENST00000233575 BTBD6Q96KE9 485 aa19.72■□□□□ 0.75
SNX17-201ENST00000233575 LHX5Q9H2C1 402 aa19.72■□□□□ 0.75
SNX17-201ENST00000233575 PRDM10Q9NQV6 1147 aa19.72■□□□□ 0.75
SNX17-201ENST00000233575 GABRDO14764 452 aa19.71■□□□□ 0.75
SNX17-201ENST00000233575 CCDC130P13994 396 aa19.71■□□□□ 0.75
SNX17-201ENST00000233575 GOLGA7BQ2TAP0 167 aa19.71■□□□□ 0.75
SNX17-201ENST00000233575 PTPN20Q4JDL3 420 aa19.71■□□□□ 0.75
SNX17-201ENST00000233575 CNKSR3Q6P9H4 555 aa19.71■□□□□ 0.75
SNX17-201ENST00000233575 RHOT2Q8IXI1 618 aa19.71■□□□□ 0.75
SNX17-201ENST00000233575 UROC1Q96N76 676 aa19.71■□□□□ 0.75
SNX17-201ENST00000233575 TRIM7Q9C029 511 aa19.71■□□□□ 0.75
SNX17-201ENST00000233575 PRG3Q9Y2Y8 225 aaPredicted RBP19.71■□□□□ 0.75
SNX17-201ENST00000233575 JRKLQ9Y4A0 524 aa19.71■□□□□ 0.75
SNX17-201ENST00000233575 HYOU1Q9Y4L1 999 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms