RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 PTPN11Q06124 597 aaPredicted RBP10.43□□□□□ -0.74
TTC1-201ENST00000231238 BMS1Q14692 1282 aaKnown RBP10.43□□□□□ -0.74
TTC1-201ENST00000231238 JADE1Q6IE81 842 aa10.43□□□□□ -0.74
TTC1-201ENST00000231238 DPY19L2P1Q6NXN4 242 aa10.43□□□□□ -0.74
TTC1-201ENST00000231238 ALKBH5Q6P6C2 394 aaKnown RBP10.43□□□□□ -0.74
TTC1-201ENST00000231238 ZNF571Q7Z3V5 609 aaPredicted RBP10.43□□□□□ -0.74
TTC1-201ENST00000231238 SERINC5Q86VE9 423 aa10.43□□□□□ -0.74
TTC1-201ENST00000231238 TMEM192Q8IY95 271 aa10.43□□□□□ -0.74
TTC1-201ENST00000231238 STK32AQ8WU08 396 aa10.43□□□□□ -0.74
TTC1-201ENST00000231238 KAT5Q92993 513 aa10.43□□□□□ -0.74
TTC1-201ENST00000231238 SECISBP2LQ93073 1101 aaKnown RBP10.43□□□□□ -0.74
TTC1-201ENST00000231238 ALS2CR12Q96Q35 445 aa10.43□□□□□ -0.74
TTC1-201ENST00000231238 MYO1AQ9UBC5 1043 aa10.43□□□□□ -0.74
TTC1-201ENST00000231238 PUF60Q9UHX1 559 aaKnown RBP10.43□□□□□ -0.74
TTC1-201ENST00000231238 A0A087X0T9 212 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 CTAGE9A4FU28 777 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 TMCO5BA8MYB1 307 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 GPR182O15218 404 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 CYP26A1O43174 497 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 EFSO43281 561 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 XPOTO43592 962 aaKnown RBP10.42□□□□□ -0.74
TTC1-201ENST00000231238 TACC1O75410 805 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 URI1O94763 535 aaPredicted RBP10.42□□□□□ -0.74
TTC1-201ENST00000231238 VNN1O95497 513 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 NFICP08651 508 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 FAM228BP0C875 321 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 HOXC8P31273 242 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 MAP2K3P46734 347 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 MYL6P60660 151 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 CUL2Q13617 745 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 TAF3Q5VWG9 929 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 SPOPLQ6IQ16 392 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 SCARA5Q6ZMJ2 495 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 C15orf39Q6ZRI6 1047 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 SESTD1Q86VW0 696 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 NT5DC4Q86YG4 428 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 GLYCTKQ8IVS8 523 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 EFCAB13Q8IY85 973 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 BEST2Q8NFU1 509 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 HELQQ8TDG4 1101 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 SHC3Q92529 594 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 ELMO3Q96BJ8 720 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 KREMEN1Q96MU8 473 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 AGPAT1Q99943 283 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 EIF2AQ9BY44 585 aaKnown RBP10.42□□□□□ -0.74
TTC1-201ENST00000231238 NIF3L1Q9GZT8 377 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 PLEKHA5Q9HAU0 1116 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 SNTG2Q9NY99 539 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 REXO2Q9Y3B8 237 aaKnown RBP10.42□□□□□ -0.74
TTC1-201ENST00000231238 GPC6Q9Y625 555 aaPredicted RBP10.42□□□□□ -0.74
TTC1-201ENST00000231238 A0A0U1RQG5 324 aaPredicted RBP10.42□□□□□ -0.74
TTC1-201ENST00000231238 TLR3O15455 904 aaKnown RBP10.42□□□□□ -0.74
TTC1-201ENST00000231238 LCA5LO95447 670 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 ITGB3P05106 788 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 H2AFZP0C0S5 128 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 HSPA6P17066 643 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 CD33P20138 364 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 HOXA11P31270 313 aaPredicted RBP10.42□□□□□ -0.74
TTC1-201ENST00000231238 NOP2P46087 812 aaKnown RBP10.42□□□□□ -0.74
TTC1-201ENST00000231238 MYO1EQ12965 1108 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 PAK2Q13177 524 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 IFI16Q16666 785 aaKnown RBP10.42□□□□□ -0.74
TTC1-201ENST00000231238 SLC10A6Q3KNW5 377 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 ZNF667Q5HYK9 610 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 C1orf229Q6ZS94 237 aaPredicted RBP10.42□□□□□ -0.74
TTC1-201ENST00000231238 H2AFVQ71UI9 128 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 FAM71AQ8IYT1 594 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 RPUSD2Q8IZ73 545 aaKnown RBP10.42□□□□□ -0.74
TTC1-201ENST00000231238 TMEM40Q8WWA1 233 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 CTNNBL1Q8WYA6 563 aaPredicted RBP10.42□□□□□ -0.74
TTC1-201ENST00000231238 DHX38Q92620 1227 aaKnown RBP10.42□□□□□ -0.74
TTC1-201ENST00000231238 TAF4BQ92750 862 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 HSH2DQ96JZ2 352 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 NOX5Q96PH1 765 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 OXCT2Q9BYC2 517 aaPredicted RBP10.42□□□□□ -0.74
TTC1-201ENST00000231238 TRIM10Q9UDY6 481 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 ITGA11Q9UKX5 1188 aa10.42□□□□□ -0.74
TTC1-201ENST00000231238 NOC2LQ9Y3T9 749 aaKnown RBP10.42□□□□□ -0.74
TTC1-201ENST00000231238 A0A0U1RQJ8 604 aa10.41□□□□□ -0.74
TTC1-201ENST00000231238 A0A1W2PQ45 241 aaPredicted RBP10.41□□□□□ -0.74
TTC1-201ENST00000231238 A0A1W2PQY0 241 aa10.41□□□□□ -0.74
TTC1-201ENST00000231238 RECQL4O94761 1208 aa10.41□□□□□ -0.74
TTC1-201ENST00000231238 SGPL1O95470 568 aa10.41□□□□□ -0.74
TTC1-201ENST00000231238 ASS1P00966 412 aaKnown RBP10.41□□□□□ -0.74
TTC1-201ENST00000231238 CST3P01034 146 aaPredicted RBP10.41□□□□□ -0.74
TTC1-201ENST00000231238 GHRP10912 638 aa10.41□□□□□ -0.74
TTC1-201ENST00000231238 BMP4P12644 408 aa10.41□□□□□ -0.74
TTC1-201ENST00000231238 ATF7P17544 494 aaPredicted RBP10.41□□□□□ -0.74
TTC1-201ENST00000231238 CD58P19256 250 aa10.41□□□□□ -0.74
TTC1-201ENST00000231238 POLR2BP30876 1174 aaKnown RBP10.41□□□□□ -0.74
TTC1-201ENST00000231238 ATICP31939 592 aa10.41□□□□□ -0.74
TTC1-201ENST00000231238 ARHGAP25P42331 645 aa10.41□□□□□ -0.74
TTC1-201ENST00000231238 TNNC1P63316 161 aa10.41□□□□□ -0.74
TTC1-201ENST00000231238 RBP5P82980 135 aa10.41□□□□□ -0.74
TTC1-201ENST00000231238 NAB2Q15742 525 aa10.41□□□□□ -0.74
TTC1-201ENST00000231238 ASTE1Q2TB18 679 aaPredicted RBP10.41□□□□□ -0.74
TTC1-201ENST00000231238 CCSAPQ6IQ19 270 aaPredicted RBP10.41□□□□□ -0.74
TTC1-201ENST00000231238 TMEM270Q6UE05 265 aa10.41□□□□□ -0.74
TTC1-201ENST00000231238 FAM228AQ86W67 206 aa10.41□□□□□ -0.74
TTC1-201ENST00000231238 SLC35F6Q8N357 371 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms