RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 TNFSF9P41273 254 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 AP3M2P53677 418 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 CCDC15Q0P6D6 951 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 TFDP3Q5H9I0 405 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 DCUN1D2Q6PH85 259 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 ASRGL1Q7L266 308 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 ECHDC2Q86YB7 292 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 WDR49Q8IV35 697 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 DENND1AQ8TEH3 1009 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 JDP2Q8WYK2 163 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 PITPNM3Q9BZ71 974 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 ARHGEF3Q9NR81 526 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 PICK1Q9NRD5 415 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 SHOC2Q9UQ13 582 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 IGKV6D-21A0A0A0MT36 114 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 POC1B-GALNT4F8VUJ3 575 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 MAGEB2O15479 319 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 ADCY3O60266 1144 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 ITGAVP06756 1048 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 RFC5P40937 340 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 CDKN2BP42772 138 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 SLC18A1P54219 525 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 PIGHQ14442 188 aaPredicted RBP17.16■□□□□ 0.34
LTBR-201ENST00000228918 WDR72Q3MJ13 1102 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 FAM47EQ6ZV65 393 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 NIPA2Q8N8Q9 360 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 TMEM35BQ8NCS4 154 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 N4BP2L2Q92802 583 aaPredicted RBP17.16■□□□□ 0.34
LTBR-201ENST00000228918 ACSF2Q96CM8 615 aaPredicted RBP17.16■□□□□ 0.34
LTBR-201ENST00000228918 HAUS1Q96CS2 278 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 TBC1D31Q96DN5 1066 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 WRNIP1Q96S55 665 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 TRABDQ9H4I3 376 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 PCDH9Q9HC56 1237 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 DDX56Q9NY93 547 aaKnown RBP17.16■□□□□ 0.34
LTBR-201ENST00000228918 TTLL13PA6NNM8 815 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 ALOX15BO15296 676 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 CCNB1P14635 433 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 CDH5P33151 784 aaPredicted RBP17.16■□□□□ 0.34
LTBR-201ENST00000228918 SKIV2L2P42285 1042 aaKnown RBP17.16■□□□□ 0.34
LTBR-201ENST00000228918 TAP1Q03518 808 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 GRM1Q13255 1194 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 TARBP2Q15633 366 aaKnown RBP17.16■□□□□ 0.34
LTBR-201ENST00000228918 STXBP2Q15833 593 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 POTEAQ6S8J7 498 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 ZPBP2Q6X784 338 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 SAMD7Q7Z3H4 446 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 KIF2BQ8N4N8 673 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 PAIP2Q9BPZ3 127 aaKnown RBP17.16■□□□□ 0.34
LTBR-201ENST00000228918 ZNF518BQ9C0D4 1074 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 MTMR12Q9C0I1 747 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 NIF3L1Q9GZT8 377 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 KIF9Q9HAQ2 790 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 SENP1Q9P0U3 644 aa17.16■□□□□ 0.34
LTBR-201ENST00000228918 LRRD1A4D1F6 860 aa17.15■□□□□ 0.34
LTBR-201ENST00000228918 NDC80O14777 642 aa17.15■□□□□ 0.34
LTBR-201ENST00000228918 KRT16P08779 473 aa17.15■□□□□ 0.34
LTBR-201ENST00000228918 RPS12P25398 132 aaKnown RBP17.15■□□□□ 0.34
LTBR-201ENST00000228918 MYL6P60660 151 aa17.15■□□□□ 0.34
LTBR-201ENST00000228918 EN1Q05925 392 aaPredicted RBP17.15■□□□□ 0.34
LTBR-201ENST00000228918 FSTL1Q12841 308 aa17.15■□□□□ 0.34
LTBR-201ENST00000228918 PKN2Q16513 984 aaKnown RBP17.15■□□□□ 0.34
LTBR-201ENST00000228918 HP1BP3Q5SSJ5 553 aaPredicted RBP17.15■□□□□ 0.34
LTBR-201ENST00000228918 GPAT2Q6NUI2 795 aa17.15■□□□□ 0.34
LTBR-201ENST00000228918 CATSPERGQ6ZRH7 1159 aa17.15■□□□□ 0.34
LTBR-201ENST00000228918 RGS9BPQ6ZS82 235 aa17.15■□□□□ 0.34
LTBR-201ENST00000228918 ZBED8Q8IZ13 594 aa17.15■□□□□ 0.34
LTBR-201ENST00000228918 WDTC1Q8N5D0 677 aa17.15■□□□□ 0.34
LTBR-201ENST00000228918 PRCCQ92733 491 aaPredicted RBP17.15■□□□□ 0.34
LTBR-201ENST00000228918 CAMKK2Q96RR4 588 aa17.15■□□□□ 0.34
LTBR-201ENST00000228918 PCYT2Q99447 389 aa17.15■□□□□ 0.34
LTBR-201ENST00000228918 MAF1Q9H063 256 aa17.15■□□□□ 0.34
LTBR-201ENST00000228918 VPS37BQ9H9H4 285 aa17.15■□□□□ 0.34
LTBR-201ENST00000228918 CISHQ9NSE2 258 aa17.15■□□□□ 0.34
LTBR-201ENST00000228918 SMG5Q9UPR3 1016 aaKnown RBP17.15■□□□□ 0.34
LTBR-201ENST00000228918 STARD13Q9Y3M8 1113 aa17.15■□□□□ 0.34
LTBR-201ENST00000228918 IBSPP21815 317 aaPredicted RBP17.14■□□□□ 0.33
LTBR-201ENST00000228918 SATB1Q01826 763 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 SPARCL1Q14515 664 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 CENPUQ71F23 418 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 SLC35B2Q8TB61 432 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 TMEM121Q9BTD3 319 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 PPCSQ9HAB8 311 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 PCDHGC3Q9UN70 934 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 A0A1B0GUA9 196 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 C19orf81C9J6K1 198 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 SGK1O00141 431 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 KRT15P19012 456 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 DNAJC3Q13217 504 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 RASA2Q15283 850 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 ZNF394Q53GI3 561 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 CAPN12Q6ZSI9 719 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 MICALL2Q8IY33 904 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 AGAP11Q8TF27 550 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 SMC6Q96SB8 1091 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 EBF2Q9HAK2 575 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 SLC24A2Q9UI40 661 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 FZD1Q9UP38 647 aa17.14■□□□□ 0.33
LTBR-201ENST00000228918 FARP1Q9Y4F1 1045 aaPredicted RBP17.14■□□□□ 0.33
LTBR-201ENST00000228918 C3orf70A6NLC5 250 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms