RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 MYO1EQ12965 1108 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 STK4Q13043 487 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 DUOXA2Q1HG44 320 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 BMT2Q1RMZ1 405 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 SLC44A4Q53GD3 710 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 STXBP5Q5T5C0 1151 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 OSTM1Q86WC4 334 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 GPIHBP1Q8IV16 184 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 ADGRF2Q8IZF7 708 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 ZSCAN18Q8TBC5 510 aaPredicted RBP15.29■□□□□ 0.04
GPN3-201ENST00000228827 SMARCD2Q92925 531 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 HPDLQ96IR7 371 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 FNBP1Q96RU3 617 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 FOXQ1Q9C009 403 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 GDAP2Q9NXN4 497 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 ASB3Q9Y575 518 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 PCDHB5Q9Y5E4 795 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 ATP6V1DQ9Y5K8 247 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 EXOC3O60645 756 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 PRR29P0C7W0 189 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 ANK1P16157 1881 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 MYL7Q01449 175 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 PFKPQ01813 784 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 VEPH1Q14D04 833 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 MLF2Q15773 248 aaPredicted RBP15.28■□□□□ 0.04
GPN3-201ENST00000228827 CCDC142Q17RM4 750 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 PHLDB3Q6NSJ2 640 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 ITIH5Q86UX2 942 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 CCDC105Q8IYK2 499 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 TMEM86AQ8N2M4 240 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 FSIP1Q8NA03 581 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 DTWD2Q8NBA8 298 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 KIAA0895Q8NCT3 520 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 SPPL2BQ8TCT7 592 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 CGRRF1Q99675 332 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 PI4K2AQ9BTU6 479 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 ATXN3LQ9H3M9 355 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 HSFX1Q9UBD0 423 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 USP25Q9UHP3 1055 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 ZNF318Q5VUA4 2279 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 DOCK8Q8NF50 2099 aa15.28■□□□□ 0.04
GPN3-201ENST00000228827 LRRN2O75325 713 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 HAPLN1P10915 354 aaPredicted RBP15.27■□□□□ 0.04
GPN3-201ENST00000228827 CD72P21854 359 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 GABRR2P28476 465 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 GPR15P49685 360 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 SNRPFP62306 86 aaKnown RBP15.27■□□□□ 0.04
GPN3-201ENST00000228827 CYP4F8P98187 520 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 BECN1Q14457 450 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 PSMD6Q15008 389 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 TAF12Q16514 161 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 SOWAHAQ2M3V2 549 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 SDHAF4Q5VUM1 108 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 VITQ6UXI7 678 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 GAREM2Q75VX8 874 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 TRAPPC11Q7Z392 1133 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 TOP6BLQ8N6T0 577 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 STKLD1Q8NE28 680 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 C2orf15Q8WU43 125 aaKnown RBP15.27■□□□□ 0.04
GPN3-201ENST00000228827 SHDQ96IW2 340 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 ACBD6Q9BR61 282 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 SCAND2PQ9GZW5 306 aaPredicted RBP15.27■□□□□ 0.04
GPN3-201ENST00000228827 GOLPH3LQ9H4A5 285 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 BRD9Q9H8M2 597 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 SIT1Q9Y3P8 196 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 TSC2P49815 1807 aa15.27■□□□□ 0.04
GPN3-201ENST00000228827 DOCK6Q96HP0 2047 aa15.27■□□□□ 0.03
GPN3-201ENST00000228827 NOTCH4Q99466 2003 aa15.27■□□□□ 0.03
GPN3-201ENST00000228827 MUC6Q6W4X9 2439 aa15.27■□□□□ 0.03
GPN3-201ENST00000228827 PRPF40AO75400 957 aaKnown RBP15.27■□□□□ 0.03
GPN3-201ENST00000228827 CST3P01034 146 aaPredicted RBP15.27■□□□□ 0.03
GPN3-201ENST00000228827 RPN1P04843 607 aaKnown RBP15.27■□□□□ 0.03
GPN3-201ENST00000228827 CASP4P49662 377 aa15.27■□□□□ 0.03
GPN3-201ENST00000228827 STARD6P59095 220 aa15.27■□□□□ 0.03
GPN3-201ENST00000228827 SMARCB1Q12824 385 aa15.27■□□□□ 0.03
GPN3-201ENST00000228827 PSMD2Q13200 908 aa15.27■□□□□ 0.03
GPN3-201ENST00000228827 INTS6LQ5JSJ4 861 aaKnown RBP15.27■□□□□ 0.03
GPN3-201ENST00000228827 GPR158Q5T848 1215 aa15.27■□□□□ 0.03
GPN3-201ENST00000228827 TPRG1Q6ZUI0 275 aa15.27■□□□□ 0.03
GPN3-201ENST00000228827 MMS19Q96T76 1030 aa15.27■□□□□ 0.03
GPN3-201ENST00000228827 TRMT61BQ9BVS5 477 aaKnown RBP15.27■□□□□ 0.03
GPN3-201ENST00000228827 GPR88Q9GZN0 384 aa15.27■□□□□ 0.03
GPN3-201ENST00000228827 GZF1Q9H116 711 aaPredicted RBP15.27■□□□□ 0.03
GPN3-201ENST00000228827 IRF2BPLQ9H1B7 796 aa15.27■□□□□ 0.03
GPN3-201ENST00000228827 HEBP1Q9NRV9 189 aa15.27■□□□□ 0.03
GPN3-201ENST00000228827 CGNQ9P2M7 1197 aaKnown RBP15.27■□□□□ 0.03
GPN3-201ENST00000228827 GTF3C4Q9UKN8 822 aa15.27■□□□□ 0.03
GPN3-201ENST00000228827 NCANO14594 1321 aa15.26■□□□□ 0.03
GPN3-201ENST00000228827 COL4A3Q01955 1670 aa15.26■□□□□ 0.03
GPN3-201ENST00000228827 KANSL1LA0AUZ9 987 aa15.26■□□□□ 0.03
GPN3-201ENST00000228827 HEPACAM2A8MVW5 462 aa15.26■□□□□ 0.03
GPN3-201ENST00000228827 CYP2F1P24903 491 aa15.26■□□□□ 0.03
GPN3-201ENST00000228827 GDI1P31150 447 aa15.26■□□□□ 0.03
GPN3-201ENST00000228827 LHX1P48742 406 aa15.26■□□□□ 0.03
GPN3-201ENST00000228827 PRKCQQ04759 706 aa15.26■□□□□ 0.03
GPN3-201ENST00000228827 UBXN2BQ14CS0 331 aa15.26■□□□□ 0.03
GPN3-201ENST00000228827 NFE2Q16621 373 aaPredicted RBP15.26■□□□□ 0.03
GPN3-201ENST00000228827 C12orf56Q8IXR9 622 aa15.26■□□□□ 0.03
GPN3-201ENST00000228827 PJA1Q8NG27 643 aa15.26■□□□□ 0.03
GPN3-201ENST00000228827 GOLGA5Q8TBA6 731 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms