RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 FNIP2Q9P278 1114 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 TBC1D14Q9P2M4 693 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 NFATC1O95644 943 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 PIGRP01833 764 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 FAM163BP0C2L3 166 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 KRT10P13645 584 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 NSFP46459 744 aaKnown RBP5.62□□□□□ -1.51
RUFY3-201ENST00000226328 COG7P83436 770 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 CDK17Q00537 523 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 ST3GAL1Q11201 340 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 UBXN2BQ14CS0 331 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 C10orf120Q5SQS8 335 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 OR6B2Q6IFH4 312 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 GIPC2Q8TF65 315 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 WNT8BQ93098 351 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 MCRS1Q96EZ8 462 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 FUBP3Q96I24 572 aaKnown RBP eCLIP5.62□□□□□ -1.51
RUFY3-201ENST00000226328 MED15Q96RN5 788 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 LSM14BQ9BX40 385 aaKnown RBP5.62□□□□□ -1.51
RUFY3-201ENST00000226328 UBE2TQ9NPD8 197 aaPredicted RBP5.62□□□□□ -1.51
RUFY3-201ENST00000226328 CNTN3Q9P232 1028 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 TJP2Q9UDY2 1190 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 MAN1B1Q9UKM7 699 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 USP20Q9Y2K6 914 aa5.62□□□□□ -1.51
RUFY3-201ENST00000226328 KCNJ18B7U540 433 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 ATG13O75143 517 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 ZMYND10O75800 440 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 NFICP08651 508 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 SLC2A3P11169 496 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 HDCP19113 662 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 SLC11A2P49281 568 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 UBASH3AP57075 661 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 DSG1Q02413 1049 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 CCDC173Q0VFZ6 552 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 TWF1Q12792 350 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 DUSP4Q13115 394 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 KCNJ12Q14500 433 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 ASIC2Q16515 512 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 IFI16Q16666 785 aaKnown RBP5.61□□□□□ -1.51
RUFY3-201ENST00000226328 MDH1BQ5I0G3 518 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 TMEM31Q5JXX7 168 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 CLLU1OSQ5K130 101 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 B3GNT9Q6UX72 402 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 ZNF662Q6ZS27 426 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 PI4K2AQ9BTU6 479 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 MMTAG2Q9BU76 263 aaKnown RBP5.61□□□□□ -1.51
RUFY3-201ENST00000226328 PRKD2Q9BZL6 878 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 VPS16Q9H269 839 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.61□□□□□ -1.51
RUFY3-201ENST00000226328 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.61□□□□□ -1.51
RUFY3-201ENST00000226328 M0QYV0 167 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 MAPK13O15264 365 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 RNF8O76064 485 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 TRIM49P0CI25 452 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 TRIM49CP0CI26 452 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 ITGB8P26012 769 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 CTNNA2P26232 953 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 FXR1P51114 621 aaKnown RBP eCLIP5.61□□□□□ -1.51
RUFY3-201ENST00000226328 ATXN3P54252 364 aaPredicted RBP5.61□□□□□ -1.51
RUFY3-201ENST00000226328 GRIN1Q05586 938 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 STK4Q13043 487 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 AMHR2Q16671 573 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 DUSP6Q16828 381 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 ANKRD54Q6NXT1 300 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 ZNF280BQ86YH2 543 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 UBALD2Q8IYN6 164 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 DEPDC1BQ8WUY9 529 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 TRIM11Q96F44 468 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 ACBD6Q9BR61 282 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 TUBGCP2Q9BSJ2 902 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 RNF39Q9H2S5 420 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 TMX1Q9H3N1 280 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 KLHL42Q9P2K6 505 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 WRAP73Q9P2S5 460 aaPredicted RBP5.61□□□□□ -1.51
RUFY3-201ENST00000226328 FBXL5Q9UKA1 691 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 BARX2Q9UMQ3 279 aaPredicted RBP5.61□□□□□ -1.51
RUFY3-201ENST00000226328 HCFC2Q9Y5Z7 792 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 CLUHO75153 1309 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 LCHNA4D1U4 455 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 ANKRD63C9JTQ0 380 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 TEX28O15482 410 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 DCXO43602 365 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 MGEA5O60502 916 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 FBXO21O94952 628 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 ABCB4P21439 1286 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 TKTP29401 623 aaKnown RBP5.61□□□□□ -1.51
RUFY3-201ENST00000226328 HOXC8P31273 242 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 ABL2P42684 1182 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 PRCPP42785 496 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 BCAT1P54687 386 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 TYRO3Q06418 890 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 BYSLQ13895 437 aaKnown RBP5.61□□□□□ -1.51
RUFY3-201ENST00000226328 RAB33AQ14088 237 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 TRIM14Q14142 442 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 MBTPS1Q14703 1052 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 ARHGAP29Q52LW3 1261 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 HSP90AA4PQ58FG1 418 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 HECTD3Q5T447 861 aa5.61□□□□□ -1.51
RUFY3-201ENST00000226328 ELOA2Q8IYF1 753 aaPredicted RBP5.61□□□□□ -1.51
RUFY3-201ENST00000226328 COLGALT2Q8IYK4 626 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms