RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 EFEMP1Q12805 493 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 HIBCHQ6NVY1 386 aaPredicted RBP19.3■□□□□ 0.68
CLIP2-201ENST00000223398 CCDC124Q96CT7 223 aaKnown RBP19.3■□□□□ 0.68
CLIP2-201ENST00000223398 TGS1Q96RS0 853 aaKnown RBP19.3■□□□□ 0.68
CLIP2-201ENST00000223398 ZFP69BQ9UJL9 534 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 SNX12Q9UMY4 172 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 MYL4P12829 197 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 SLC8A1P32418 973 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 MFSD10Q14728 455 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 KRT80Q6KB66 452 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 RBM15Q96T37 977 aaKnown RBP eCLIP19.3■□□□□ 0.688e-6■■■■■ 30.1
CLIP2-201ENST00000223398 ADA2Q9NZK5 511 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 TFR2Q9UP52 801 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 PMPCBO75439 489 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 DCTN3O75935 186 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 HMOX2P30519 316 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 TSSK1BQ9BXA7 367 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 TRIM15Q9C019 465 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 HMX1Q9NP08 348 aaPredicted RBP19.3■□□□□ 0.68
CLIP2-201ENST00000223398 TCRBV5S4A2TA0A5A2 114 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 NKRFO15226 690 aaKnown RBP eCLIP19.3■□□□□ 0.686e-8■■■□□ 14.8
CLIP2-201ENST00000223398 P4HA2O15460 535 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 ALDH2P05091 517 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 Q4G0T1 1027 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 MDH1BQ5I0G3 518 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 PKP3Q9Y446 797 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 PCDHB12Q9Y5F1 795 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 GYG2O15488 501 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 PHF2O75151 1096 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 RSAD1Q9HA92 442 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 TRIM33Q9UPN9 1127 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 PSMD3O43242 534 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 CAPN15O75808 1086 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 EFTUD2Q15029 972 aaKnown RBP eCLIP19.29■□□□□ 0.68
CLIP2-201ENST00000223398 MEI1Q5TIA1 1274 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 MOB2Q70IA6 237 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 KCTD17Q8N5Z5 321 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 FAM71DQ8N9W8 422 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 ARL8AQ96BM9 186 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 CYFIP2Q96F07 1278 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 APOL5Q9BWW9 433 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 ZCWPW1Q9H0M4 648 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 PCDHAC2Q9Y5I4 1007 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.29■□□□□ 0.68
CLIP2-201ENST00000223398 PSMC6P62333 389 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 RIOX1Q9H6W3 641 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 PCDHGB4Q9UN71 923 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 SALL1Q9NSC2 1324 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 STRNO43815 780 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 PPP3CCP48454 512 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 PPATQ06203 517 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 NAA30Q147X3 362 aaPredicted RBP19.29■□□□□ 0.68
CLIP2-201ENST00000223398 CYP4F11Q9HBI6 524 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 ALG6Q9Y672 507 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 FRMD3A2A2Y4 597 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 FOXN3O00409 490 aaPredicted RBP19.29■□□□□ 0.68
CLIP2-201ENST00000223398 ASS1P00966 412 aaKnown RBP19.29■□□□□ 0.68
CLIP2-201ENST00000223398 RBP3P10745 1247 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 KCNJ1P48048 391 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 MOXD1Q6UVY6 613 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 NEU2Q9Y3R4 380 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 DISP2A7MBM2 1401 aa19.29■□□□□ 0.68
CLIP2-201ENST00000223398 F5H5T6 163 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 BTG3Q14201 252 aaPredicted RBP19.28■□□□□ 0.68
CLIP2-201ENST00000223398 MTHFD1LQ6UB35 978 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 ATP8B4Q8TF62 1192 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 ELMO3Q96BJ8 720 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 ARHGAP10A1A4S6 786 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 DDHD2O94830 711 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 SLC26A2P50443 739 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 ARFIP2P53365 341 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 ACVR2BQ13705 512 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 PTGISQ16647 500 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 SENP6Q9GZR1 1112 aaPredicted RBP19.28■□□□□ 0.68
CLIP2-201ENST00000223398 FGFR1OP2Q9NVK5 253 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 TPX2Q9ULW0 747 aaKnown RBP19.28■□□□□ 0.68
CLIP2-201ENST00000223398 MYL6P60660 151 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 FAXCQ5TGI0 409 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 THAP2Q9H0W7 228 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 KPNA6O60684 536 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 RALBP11234 206 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 PPP2R2AP63151 447 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 CD302Q8IX05 232 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 DDI1Q8WTU0 396 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 ABHD16BQ9H3Z7 469 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 GPATCH2LQ9NWQ4 482 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 TRPM5Q9NZQ8 1165 aa19.28■□□□□ 0.68
CLIP2-201ENST00000223398 KCNT1Q5JUK3 1230 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 RASIP1Q5U651 963 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 ZNF677Q86XU0 584 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 SCFD1Q8WVM8 642 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 MRFAP1Q9Y605 127 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 GYPCP04921 128 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 PTPRAP18433 802 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 AVPR1AP37288 418 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 TOB1P50616 345 aaPredicted RBP19.27■□□□□ 0.68
CLIP2-201ENST00000223398 PRAMEF19Q5SWL8 479 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 SLC12A8A0AV02 714 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 CHRM3P20309 590 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 FSCN1Q16658 493 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms