RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 ANKMY2Q8IV38 441 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 UBXN6Q9BZV1 441 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 PNMA8BQ9ULN7 279 aaPredicted RBP11.01□□□□□ -0.65
TRPS1-201ENST00000220888 ANO9A1A5B4 782 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 IFRD1O00458 451 aaPredicted RBP11.01□□□□□ -0.65
TRPS1-201ENST00000220888 VWA5AO00534 786 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 THP07101 528 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 MRPS25P82663 173 aaKnown RBP11.01□□□□□ -0.65
TRPS1-201ENST00000220888 C16orf86Q6ZW13 317 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 SLC30A5Q8TAD4 765 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 DIS3LQ8TF46 1054 aaKnown RBP11.01□□□□□ -0.65
TRPS1-201ENST00000220888 MTG1Q9BT17 334 aaPredicted RBP11.01□□□□□ -0.65
TRPS1-201ENST00000220888 PYCARDQ9ULZ3 195 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 SOAT2O75908 522 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 CAMTA2O94983 1202 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 SPRP35270 261 aaPredicted RBP11.01□□□□□ -0.65
TRPS1-201ENST00000220888 SERPINB9P50453 376 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 PRKAA1Q13131 559 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 CUL4AQ13619 759 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 PRUNE1Q86TP1 453 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 REEP2Q9BRK0 252 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 DYRK1BQ9Y463 629 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 KDM6BO15054 1643 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 HNRNPRO43390 633 aaKnown RBP11.01□□□□□ -0.65
TRPS1-201ENST00000220888 GTF2E2P29084 291 aaKnown RBP11.01□□□□□ -0.65
TRPS1-201ENST00000220888 RHOAP61586 193 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 SNRPFP62306 86 aaKnown RBP11.01□□□□□ -0.65
TRPS1-201ENST00000220888 CUL3Q13618 768 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 DDX39BQ13838 428 aaKnown RBP11.01□□□□□ -0.65
TRPS1-201ENST00000220888 NCAPHQ15003 741 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 LRRC8BQ6P9F7 803 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 MARCH10Q8NA82 808 aaPredicted RBP11.01□□□□□ -0.65
TRPS1-201ENST00000220888 ZCWPW1Q9H0M4 648 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 RPRD1BQ9NQG5 326 aaKnown RBP11.01□□□□□ -0.65
TRPS1-201ENST00000220888 KCNH7Q9NS40 1196 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.01□□□□□ -0.65
TRPS1-201ENST00000220888 GRID2IPA4D2P6 1211 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 CYB561D2O14569 222 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 RHOCP08134 193 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 SLC9A1P19634 815 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 GARTP22102 1010 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 PEX19P40855 299 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 ATP2C1P98194 919 aaPredicted RBP11□□□□□ -0.65
TRPS1-201ENST00000220888 NFE2Q16621 373 aaPredicted RBP11□□□□□ -0.65
TRPS1-201ENST00000220888 LINC00523Q86TU6 105 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 SRBD1Q8N5C6 995 aaKnown RBP11□□□□□ -0.65
TRPS1-201ENST00000220888 CAMKK1Q8N5S9 505 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 CHAMP1Q96JM3 812 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 PPP1R36Q96LQ0 422 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 CGRRF1Q99675 332 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 TARS2Q9BW92 718 aaKnown RBP11□□□□□ -0.65
TRPS1-201ENST00000220888 NLNQ9BYT8 704 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 WWP1Q9H0M0 922 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 DDX47Q9H0S4 455 aaKnown RBP11□□□□□ -0.65
TRPS1-201ENST00000220888 RSAD1Q9HA92 442 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 KRCC1Q9NPI7 259 aaPredicted RBP11□□□□□ -0.65
TRPS1-201ENST00000220888 HMGB3O15347 200 aaKnown RBP11□□□□□ -0.65
TRPS1-201ENST00000220888 POLBP06746 335 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 SLC16A1P53985 500 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 PPM1LQ5SGD2 360 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 GPAT2Q6NUI2 795 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 ZNF555Q8NEP9 628 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 BLOC1S5Q8TDH9 187 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 OSCP1Q8WVF1 389 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 GOLPH3LQ9H4A5 285 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 NDOR1Q9UHB4 597 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 ABCA8O94911 1581 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 RFX7Q2KHR2 1363 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 CPSF1Q10570 1443 aaKnown RBP11□□□□□ -0.65
TRPS1-201ENST00000220888 SLC12A8A0AV02 714 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 M0QYT0 321 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 RHOBTB3O94955 611 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 ITGALP20701 1170 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 PTGER2P43116 358 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 SLC45A4Q5BKX6 768 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 DSG4Q86SJ6 1040 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 SOCS4Q8WXH5 440 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 OXCT2Q9BYC2 517 aaPredicted RBP11□□□□□ -0.65
TRPS1-201ENST00000220888 PAK5Q9P286 719 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 PDZK1P1A8MUH7 402 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 ARHGEF9O43307 516 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 MAN1A2O60476 641 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 MYL2P10916 166 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 MUTP22033 750 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 PRIM2P49643 509 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 GEMP55040 296 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 DHX34Q14147 1143 aaKnown RBP11□□□□□ -0.65
TRPS1-201ENST00000220888 HLA-DQA1Q5Y7H0 255 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 SYDE1Q6ZW31 735 aaPredicted RBP11□□□□□ -0.65
TRPS1-201ENST00000220888 FBXO16Q8IX29 292 aaPredicted RBP11□□□□□ -0.65
TRPS1-201ENST00000220888 SPIRE2Q8WWL2 714 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 FAM162AQ96A26 154 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 CDK5RAP1Q96SZ6 601 aaKnown RBP11□□□□□ -0.65
TRPS1-201ENST00000220888 MRPL9Q9BYD2 267 aaKnown RBP11□□□□□ -0.65
TRPS1-201ENST00000220888 STK33Q9BYT3 514 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 MLXIPLQ9NP71 852 aa11□□□□□ -0.65
TRPS1-201ENST00000220888 PDHXO00330 501 aa10.99□□□□□ -0.65
TRPS1-201ENST00000220888 NDUFS2O75306 463 aa10.99□□□□□ -0.65
TRPS1-201ENST00000220888 BACE1P56817 501 aa10.99□□□□□ -0.65
TRPS1-201ENST00000220888 EFEMP1Q12805 493 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms